Forschungszentrum Jülich
somesy
Somesy (software metadata sync) is a CLI tool to avoid messy software project metadata by keeping it in sync.
- FAIR Software
- python
- Python
spirit
Spirit is a platform-independent framework for atomistic spin-dynamics. It combines the traditional cluster workflow through a C-API with python bindings with modern visualisation capabilities in order to maximise scientists' productivity.
- Atomistic Spin Dynamics
- C++
- CUDA
- + 5
- C++
- Python
- CMake
- + 9
supervillain
supervillain does Markov-Chain Monte Carlo for modified Villain constructions of quantum field theory.
- computational physics
- Monte Carlo simulation
- Physics
- + 2
- Python
- TeX
- Makefile
- + 2
TERENO-DOI
A web-based application for creating, publishing, and managing digital object identifiers (DOIs) especially for publications within the TERENO initiative.
- catalogue
- data managment
- Data Publications
- + 9
- Vue
- JavaScript
- HTML
- + 1
Trimmomatic
Trimmomatic is a command line tool that performs a variety of functions for Illumina paired-end and single-end sequencing data, including sequence trimming and adapter removal. It is a flexible and efficient NGS preprocessing tool, which greatly improves downstream applications.
- Earth & Environment
- Illumina
- NGS
- Java
- Dockerfile
TSMP
The Terrestrial Systems Modelling Platform (TSMP) is an open source framework implementing a scale-consistent, highly modular, massively parallel regional Earth system model. It represents transport and feedback processes of mass, energy and momentum across geo-ecosystem compartments and scales.
- Earth & Environment
- Fortran
- Shell
- C
- + 10
TSMP2
The Terrestrial Systems Modelling Platform (TSMP) is an open source framework implementing a scale-consistent, highly modular, massively parallel regional Earth system model. It represents transport and feedback processes of mass, energy and momentum across geo-ecosystem compartments and scales.
- Earth & Environment
- FAIR Software
- Hydrology
- + 1
- CMake
- Shell
uNAC
uNAC - the universal natural abundace correction tool for istotopic labeling data
- 13C
- mass spectrometry
- metabolic networks
- + 1
- Python
- Dockerfile
UNICORE
UNICORE (UNiform Interface to COmputing REsources) provides tools and services for building federated systems, making high-performance computing and data resources accessible in a seamless and secure way for a wide variety of applications in intranets and the internet.
- High performance computing
- Information
- Supercomputing
- + 1
UniHarmony
UniHarmony is a sklearn-inspired open-source Python library that aims to implement state-of-the-art data harmonization methods in a unified, standardized language, with extensive documentation and several use-case examples.
- Data analysis
- Image processing
- Machine learning
- + 2
- Python
- Just
- Shell
UTILE-Oxy
Automated workflow using deep learning for the analysis of videos containing oxygen bubbles in PEM electrolyzers: 1. preparing annotated dataset and training models to conduct semantic seg- mentation of bubbles and 2. automating the extraction of bubble properties for further distribution analysis.
- bubbles
- Data analysis
- Data Visualization
- + 7
- Python
- Jupyter Notebook
Vitess
Vitess is an open source software package for the simulation of neutron scattering experiments that comprises all established instrument hardware such as neutron optics, wavelength selectors and a growing variety of samples.