All software
anvi'o
anvi'o is an open-source software platform for microbial 'omics research enabling analysis and visualization of 'omics data. In development since 2014, it is currently being maintained by the Ecosystem Data Science group at the Helmholtz Institute for Functional Marine Biodiversity.
- Data analysis
- Data Visualization
- Metagenomics
- + 4
- Python
- JavaScript
- Shell
- + 6
ICON
ICON (Icosahedral Nonhydrostatic) is a flexible, scalable, high-performance modelling framework for weather, climate and environmental prediction . It is collaboratively developed and maintained by the ICON partnership (MPI-M, DWD, DKRZ, C2SM, KIT)
- Aerosol Research
- Atmospheric science
- Climate
- + 4
- Fortran Free Form
- Shell
- NCL
- + 2
ASPECT - The Advanced Solver for Planetary Evolution, Convection, and Tectonics
ASPECT is a code to simulate convection and tectonic processes in the Earth and other planetary bodies. It has grown from a mantle-convection code into a tool for many geodynamic applications, like glacial isostatic adjustment, lithospheric scale deformation, ore formation and two-phase flow.
- C++
- CFD
- Computational Fluid Dynamics
- + 6
- C++
- Python
- CMake
- + 10
IGMAS+
IGMAS+ (Interactive Gravity and Magnetic Application System) is a software combining 3-D forward and inverse modeling, interactive visualization and interdisciplinary interpretation of potential fields and their applications under geophysical and geological data constrains.
- 3D
- Cross-platform
- Earth & Environment
- + 8
PDAF
PDAF - the Parallel Data Assimilation Framework is one of the most widely used a software frameworks for data assimilation. PDAF provides support for ensemble modeling and fully implemented data assimilation methods to merge models and observational data which let models learn from observations.
- Atmospheric science
- data assimilation
- Earth & Environment
- + 9
- Fortran
- Makefile
- Python
- + 3
MESSy
MESSy is a software framework for the assembly of Earth System Models with components, which are numerical representations of processes in the Earth system. The unique feature of MESSy is its modular structure that facilitates continuous development and flexible model configurations.
- Aeronautics, Space and Transport
- Atmospheric science
- Earth & Environment
- + 5
CPlantBox
CPlantBox is a functional-structural plant-soil modelling framework. It simulated the 3D architecture of a plant, coupled carbon and water flow within the plant, water flow and solute transport in a 3D dynamic soil, as well as water and nutrient uptake, and rhizodeposition.
- C++
- FSPM
- functional-structural soil-plant model
- + 2
- Python
- C++
- CMake
- + 3
MercuryDPM
MercuryDPM is an open-source C++ framework for discrete particle simulations of granular materials, powders, and other particulate systems. It was started in 2009 to support complex scientific and industrial particle simulations. MercuryDPM is developed by an international open-source community.
- Computational Granular Mechanics
- Discrete Element Method
- Discrete Particle Method
- + 3
CADET
CADET provides hierarchical models, efficient solvers and computational engineering tools for a range of biotechnological processes, including chromatography, filtration, crystallization, and fermentation.
- adsorption
- chromatography
- compartment modelling
- + 4
- C++
- CMake
- C
- + 5
CoMOLA
CoMOLA is a python tool for optimal spatial allocation of land uses. The tool creates optimal land-use maps for up to four objectives. It takes into account constraints and can be coupled with external models to evaluate different objectives (e.g. ecosystem services/biodiversity models)
- land-use allocation
- multi-objective optimization
- NSGA-II
- Python
- R
JURASSIC
The Juelich Rapid Spectral Simulation Code (JURASSIC) is an open source, high performance infrared radiative transfer and retrieval model for atmospheric remote sensing applications.
- Atmospheric science
- Climate
- Earth & Environment
- + 7
- C
- Shell
- Visual Basic 6.0
- + 1
GOLEM
GOLEM is a modelling platform for thermal-hydraulic-mechanical and non-reactive chemical processes in fractured and faulted porous media, based on the MOOSE framework
- Earth & Environment
- Multiphysics of porous fractured rocks
- reservoir behaviour and induced seismicity
- + 1
- C++
- SWIG
- Assembly
- + 5