All software
MO|DE.behave
MO|DE.behave is a Python-based software package for the estimation and simulation of discrete choice models and shall enable rapid quantitative analyses based on survey data on choice behavior, utilizing advanced discrete choice methods. Please refer to 'doi.org/10.21105/joss.05265'.
- Python
- TeX
motley-cue
enable SSH with federated identities
- AAI
- Helmholtz AAI
- OIDC
- + 1
- Python
- Makefile
- Shell
m-pax_lib
Multi-path Explanations Library
- Disentangled Representations
- Explanatory AI
- Medical Imaging
- + 1
- Python
- R
MTRESS
MTRESS (Model Template for Renewable Energy Supply Systems) facilitates the creation of energy system optimisation models for individual residential and commercial buildings as well as for neighbourhoods and entire industrial properties.
- Energy
- ESD
- ESD - Topic 2
- Python
Multiphase Python Repository by HZDR
Toolkit for reproducible multiphase CFD workflows.
- gitlab
- Numerical Simulations
- Post-processing
- + 1
- Python
- Jinja
- Shell
- + 2
NESTML
NESTML is a domain-specific language for neuron and synapse models. It combines an easy to understand, yet powerful syntax with good simulation performance by means of code generation.
- Modelling
- Simulation
- spiking neural networks
- Python
- Jinja
- ANTLR
- + 4
NeXusCreator
Python CLI & API for converting heterogeneous experimental data into validated NeXus (HDF5) files using reusable mapping templates and extensible workflows.
- Python
- Makefile
- Shell
nnU-Net
Automatic configuration and training of U-Net-based segmentation pipelines. Works out-of-the-box for a broad range of datasets from all imaging domain! Supports 2D and 3D (multi-channel) images.
- 2D images
- 3D images
- semantic segmentation
- + 1
- Python
- Shell
novoSpaRc
novoSpaRc predicts locations of single cells in space by solely using single-cell RNA sequencing data. An existing reference database of marker genes is not required, but significantly enhances performance if available.
- Data analysis
- open source
- single-cell RNA-seq
- Jupyter Notebook
- HTML
- Python
Nexus - Nuclear Elastic X-ray scattering Universal Software
The Nuclear Elastic X-ray scattering Universal Software (Nexus) is a Python package for simulating and fitting of Mossbauer spectra, nuclear resonant scattering (NRS) data, pure electronic X-ray reflectivities (XRR), nuclear X-ray reflectivities, and polarization dependent electronic scattering.
- Mossbauer
- Mossbauer spectroscopy
- Nuclear resonant scattering
- + 1
- C++
- Python
- SWIG
- + 2
ODM2SMS
A tool to migrate sensor metadata from the observation data model to the Helmholtz Sensor Management System via API.
- Earth & Environment
- metadata
- Research Data Management
- + 1
- Python
- PLpgSQL
- Dockerfile
oeip
is a software package to find provably equivalent embedded Ising problems with optimal parameters.
- Combinatorial Optimization
- Embedding
- Ising Problem
- + 3
- Python
- Shell