BaSiCPy

BaSiCPy is a Python package that corrects uneven illumination and temporal drifts for microscopy images

3
contributors
Get started
101 commitsLast commit ≈ 8 months ago83 stars23 forks

Description

BaSiCPy is a microscopy image correction package in python (MATLAB and FIJI/ImageJ versions are also available). It achieves high-accuracy with significantly fewer input images, and works for diverse imaging conditions with no manual parameters required. Moreover, BaSiCPy can correct temporal drift in time-lapse microscopy data and thus improve continuous single-cell quantification.

Logo of BaSiCPy
Keywords
No keywords available
Programming language
  • Python 100%
License
Not specified
</>Source code

Contributors

YL
Yu Liu
YF
Yohsuke Fukai
RIKEN Center for Biosystems Dynamics Research
TP
Tingying Peng