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Nexus - Nuclear Elastic X-ray scattering Universal Software

The Nuclear Elastic X-ray scattering Universal Software (Nexus) is a Python package for simulating and fitting of Mossbauer spectra, nuclear resonant scattering (NRS) data, pure electronic X-ray reflectivities (XRR), nuclear X-ray reflectivities, and polarization dependent electronic scattering.

Mossbauer
Mossbauer spectroscopy
Nuclear resonant scattering
+ 1

C++
SWIG
Python
+ 2

ODM2SMS

A tool to migrate sensor metadata from the observation data model to the Helmholtz Sensor Management System via API.

Earth & Environment
metadata
Research Data Management
+ 1

Python

oidc-agent

oidc-agent is an OpenID Connect tool suite designed to simplify authentication processes for command-line applications and workflows that require access to resources protected by OIDC. It provides a secure, but user-friendly way to manage tokens on the command-line.

AAI
command-line
OIDC
+ 2

C
C++
Makefile
+ 4

openFuelCell2

openFuelCell2 is a computational fluid dynamics (CFD) toolbox for simulating electrochemical devices such as fuel cells and electrolysis. The solver is based on the open-source library, OpenFOAM®.

Electrolyzer
Energy
Fuel cells
+ 1

C
C++
Python
+ 2

openPMD-api

openPMD is an open meta-data schema that provides meaning and self-description for datasets in science and engineering. This library provides a reference API for openPMD data handling, supporting established I/O backends such as HDF5, ADIOS2, JSON and TOML from serial to MPI-parallel workflows.

ADIOS
data
file-format
+ 8

C++
Python
CMake
+ 4

OSADCP Toolbox

Open-source Python toolbox called OSADCP for scientists to convert, clean, calibrate and organize binary raw vessel-mounted Acoustic Doppler Current Profiler (ADCP) data for scientific use. The toolbox is designed to process ADCP measurements in deep water by Teledyne RDI Ocean Surveyor ADCPs.

Data Visualization
Earth & Environment
FAIR Data
+ 5

Python

otter

The otter Framework combines community network analysis using Co-Occurrence networks, Louvain Clustering and Convergent Cross Mapping networks. Funding through the Helmholtz DataHub Initiative; project iLOVE.

Community Dynamics
Earth & Environment
python

Python

PeakPerformance

PeakPerformance is a Python toolbox for estimating peak areas from mass-spectrometry or HPLC datasets under uncertainty. It applies Bayesian inference using the PyMC library to parametric models of peak curves.

Data analysis
Earth & Environment
mass spectrometry
+ 4

Python
TeX

php-codemeta-crosswalk

Codemeta conversions tool

BibLatex
BibTex
Codemeta Converter
+ 5

PiGx

PiGx is a collection of genomics pipelines. All pipelines are easily configured with a simple sample sheet and a descriptive settings file. The result is a set of comprehensive, interactive HTML reports with interesting findings about your samples.

HTML
Python
R
+ 7

PointNeighbors.jl

PointNeighbors.jl is a package for neighborhood search with fixed search radius in 1D, 2D and 3D point clouds.

Julia

Potsdam Open-source Radio interferometry Tool (PORT)

PORT is a software package dedicated to the analysis of modern and historical Very Long Baseline Interferometry (VLBI) observations. It is utilized to perform the GFZ VLBI Analysis Center responsibilities, as well as state-of-the-art research in space geodesy, geophysics, and astrometry.

Astrometry
Earth orientation parameters
Reference frames
+ 1

Python
MATLAB
Fortran
+ 2