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97-108 of 152

PeakPerformance

PeakPerformance is a Python toolbox for estimating peak areas from mass-spectrometry or HPLC datasets under uncertainty. It applies Bayesian inference using the PyMC library to parametric models of peak curves.

Data analysis
Earth & Environment
mass spectrometry
+ 4

Python

PedPy

PedPy is a Python library for the analysis of pedestrian movement data.

pedestrian analysis
pedestrian dynamics
research software

Pascal
Python
Jupyter Notebook
+ 1

PeriHub

PeriHub is a platform that provides a numerical implementation of the peridynamic theory. It is an extension of the open source Peridigm software. Peridynamics is a non-local theory that overcomes discontinuity problems of the classical theory of continuum mechanics.

Data Visualization
High performance computing
Modelling
+ 2

Python
Vue
JavaScript
+ 5

perun

perun is a Python package that calculates the energy consumption of Python scripts by sampling usage statistics from hardware interfaces. It can handle MPI applications, gather data from hundreds of nodes, and accumulate it efficiently.

Earth & Environment
Energy
FAIR Software
+ 2

Python

PeTrack

PeTrack (Pedestrian Tracking) automatically extracts accurate pedestrian trajectories from video recordings (calibration, recognition, tracking). Individual codes enable personalized trajectories with static information of each participant. With a stereo camera also markerless tracking is possible.

Calibration
Correction
Crowd
+ 12

C++
Python
CMake
+ 2

398

Prospective Monitoring and Management - App (PIA)

PIA is a free open-source eResearch System for monitoring of incident events and provides a digital infrastructure for conducting population-based studies in any research field - at a study centre or at home. PIA focuses on repeated surveys. #DigitalEpidemiology #LongitudinalDataCollection #FOSS

Data Collection
Digital Infrastructure
epidemiology
+ 5

TypeScript
HTML
JavaScript
+ 10

PIConGPU

PIConGPU is a relativistic Particle-in-Cell code running on graphic processing units as well as regular multi-core processors. It is Open Source und is freely available for download. It can be used to study plasmas with relativistic dynamics, solving the Maxwell-Vlasov system of equations.

CPU
GPU
Matter
+ 2

C++
Python
Shell
+ 5

PiGx

PiGx is a collection of genomics pipelines. All pipelines are easily configured with a simple sample sheet and a descriptive settings file. The result is a set of comprehensive, interactive HTML reports with interesting findings about your samples.

HTML
Python
R
+ 7

PostWRF

PostWRF is a bunch of interactive tools, written in NCL and Bash scripts, to visualize and post-process the WRF and ERA5 model outputs.

NCL
Shell
Python

Potsdam Open-source Radio interferometry Tool (PORT)

PORT is a software package dedicated to the analysis of modern and historical Very Long Baseline Interferometry (VLBI) observations. It is utilized to perform the GFZ VLBI Analysis Center responsibilities, as well as state-of-the-art research in space geodesy, geophysics, and astrometry.

Astrometry
Earth orientation parameters
Reference frames
+ 1

Python
MATLAB
Fortran
+ 2

ProFASi

PROFASI (PROtein Folding and Aggregation SImulator) is a C++ package for HPC Monte Carlo simulations of protein folding and aggregation. It provides an all atom, implicit solvent force field, and a set of tools to perform Monte Carlo simulations.

Monte Carlo
Peptide Aggregation
Protein folding
+ 2

C++
Hack
CMake
+ 2

Propulate

An asynchronous evolutionary optimization algorithm and software package for global optimization and hyperparameter search on high-performance computers.

Aeronautics, Space and Transport
Earth & Environment
Energy
+ 9

Python