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HIFIS Software Spotlights

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Logo for PDAF

PDAF

PDAF - the Parallel Data Assimilation Framework is one of the most widely used a software frameworks for data assimilation. PDAF provides support for ensemble modeling and fully implemented data assimilation methods to merge models and observational data which let models learn from observations.

  • Atmospheric science
  • data assimilation
  • Earth & Environment
  • + 9
  • Fortran
  • Shell
  • Makefile
  • + 3
5
420

CUAS-MPI

CUAS-MPI is the MPI-parallel implementation of the confined-unconfined aquifer system model for subglacial hydrology. The model uses a single-layer equivalent porous medium approach and solves a two-dimensional Darcy-type groundwater flow equation.

  • C++
  • Earth & Environment
  • FAIR Software
  • + 4
  • C++
  • CMake
  • C
  • + 1
4
19
Logo for EnPT

EnPT

The Environmental Mapping and Analysis Program (EnMAP) is a German hyperspectral satellite mission that aims at monitoring and characterising Earth’s environment on a global scale. EnMAP measures and models key dynamic processes of Earth’s ecosystems by extracting geochemical, biochemical and biophy

  • Earth & Environment
  • EnMAP
  • Hyperspectral
  • + 2
  • Python
  • Shell
8
1
Logo for DeepLOKI

DeepLOKI

DeepLOKI is an AI-based software that uses deep learning to classify zooplankton species from high-resolution images, improving research efficiency by enabling faster and more accurate onboard image analysis in marine science.

  • Data analysis
  • Earth & Environment
  • Machine learning
  • + 2
  • Python
5
0
Logo for geogravL3

geogravL3

Python package for the gravity data processing from spherical harmonic coefficients (Level-2) data to gridded Level-3 data.

  • cryosphere
  • Data analysis
  • FAIR Software
  • + 7
  • Python
  • nesC
  • Makefile
  • + 1
4
0

hextraj: hex labelling of trajectory data

hextraj maps longitude/latitude positions onto a projected hexagonal grid and provides tools for aggregating trajectory data over hex cells and for computing origin-destination connectivity between them.

  • connectivity
  • dask
  • geospatial
  • + 7
    1
    0
    Logo for Lightning UQ Box

    Lightning UQ Box

    The lightning-uq-box is a PyTorch library that provides various Uncertainty Quantification (UQ) techniques for modern neural network architectures.

    • Deep Learning
    • python
    • uncertainty quantification
    • Python
    0
    0
    Logo for MemRBC

    MemRBC

    MemRBC is an R package for spectral modeling of red blood cell shapes in R. It is the result of open science research, demonstrating the idea of hi-level apps with metadata creation in a lightweight obejct oriented approach.

    • cell shape
    • Helfrich
    • R
    • + 5
    • R
    • JavaScript
    • C++
    • + 1
    0
    0

    OSADCP Toolbox

    Open-source Python toolbox called OSADCP for scientists to convert, clean, calibrate and organize binary raw vessel-mounted Acoustic Doppler Current Profiler (ADCP) data for scientific use. The toolbox is designed to process ADCP measurements in deep water by Teledyne RDI Ocean Surveyor ADCPs.

    • Data Visualization
    • Earth & Environment
    • FAIR Data
    • + 5
    • Python
    • MATLAB
    0
    0
    Logo for pycmor

    pycmor

    A Python package that simplifies the conversion of climate model output into CMOR-compliant formats, supporting CMIP6 and CMIP7 standards. Provides a modular, plugin-based pipeline for processing NetCDF data from diverse Earth system models.

    • CF-conventions
    • climate model output
    • CMIP6
    • + 7
    • Python
    4
    0
    Logo for pyPDAF

    pyPDAF

    pyPDAF provides the functionality to use the Parallel Data Assimilation Framework (PDAF) fully in Python. One can use all functionality of PDAF while implementing the case-specific code for the chosen data assimilation application in Python.

    • Atmospheric science
    • Bayesian inference
    • data assimilation
    • + 8
    • Cython
    • Python
    • Fortran
    • + 4
    2
    0