All HIFIS Software Spotlights

The Helmholtz Software Spotlights present outstanding software products that are developed and maintained in Helmholtz research centres. We want to raise awareness for the general importance of research software in academia, and present software that appeals equally to research, citizens, industry and politics.

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1-12 of 30

Kadi4Mat

Kadi4Mat is an open-source software for managing research data, which supports close cooperation between experimenters, theorists, and simulators, especially in the field of materials science.

• Earth & Environment
• Electronic Lab Notebook
• Energy
• + 10

• Python
• Vue
• HTML
• + 2

1

5

matRad

matRad is a dose calculation and inverse treatment planning toolkit for radiotherapy research and education written in Matlab.

• Health
• Medical Physics
• Particle Therapy
• + 2

• MATLAB
• C++
• Shell

1

149

Millepede II

Millepede II has been developed to solve the linear least squares problem with a simultaneous fit of all global and local parameters, irrespectively of the number of local parameters.

• Alignment
• Large linear equation system
• Matter
• + 1

• Fortran Free Form
• C
• Python
• + 2

0

0

Tamarin Prover

The Tamarin Prover is a state-of-the-art tool for the analysis of security protocols, which underpin the security of modern distributed computing.

• Cryptographic Protocols
• Formal Verification
• Information

• Haskell
• Python
• JavaScript
• + 8

0

0

CrystFEL

CrystFEL is a suite of programs to process data from "serial crystallography" experiments.

• crystallography
• Matter
• structural biology
• + 2

• C
• Julia
• Python
• + 2

25

320

NEST

NEST is a simulator for spiking neuronal networks. A well tested and efficient tool, NEST works on your laptop and also on the world’s largest supercomputers to study behaviour of large networks of neurons.

• Computational neuroscience
• exascale
• Modeling
• + 3

• C++
• Python
• CMake
• + 3

119

542

Multiphase Code Repository by HZDR for OpenFOAM Foundation Software

This software publication is released by Helmholtz-Zentrum Dresden-Rossendorf according to FAIR principles. It contains experimental research work for the numerical simulation of multiphase flows. The development is based on the open-source software released by the OpenFOAM Foundation.

• Computational Fluid Dynamics
• Energy
• Euler-Euler method
• + 5

15

18

FormatFuzzer

FormatFuzzer is a framework for high-efficiency, high-quality generation and parsing of binary inputs.

• Automated Test Generation
• Fuzzing
• Information
• + 3

• Python
• C++
• Shell
• + 2

0

0

MassBank

MassBank is an open source mass spectral library for the identification of small chemical molecules of metabolomics, exposomics and environmental relevance.

• database
• Earth & Environment
• mass spectrometry

0

0

FishInspector

The software FishInspector provides automatic feature detections in images of zebrafish embryos (body size, eye size, pigmentation). It is Matlab-based and provided as a Windows executable (no matlab installation needed).

• Earth & Environment
• image feature detection
• pattern recognition
• + 1

• MATLAB
• HTML

0

0

GOLEM

GOLEM is a modelling platform for thermal-hydraulic-mechanical and non-reactive chemical processes in fractured and faulted porous media, based on the MOOSE framework

• Earth & Environment
• Multiphysics of porous fractured rocks
• reservoir behaviour and induced seismicity
• + 1

• C++
• SWIG
• Assembly
• + 5

3

109

LYNX

LYNX (Lithosphere dYnamics Numerical toolboX) is a novel numerical simulator for modelling thermo-poromechanical coupled processes driving the deformation dynamics of the lithosphere.

• damage rheology and porosity feedback
• Earth & Environment
• Explicit visco-elasto-plastic rheology
• + 1

• C++
• Assembly
• Makefile
• + 4

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