All software
GR Framework
GR is a framework for cross-platform visualization applications for interactive plots or live displays of instruments. GR can easily be embedded in Qt applications or Jupyter notebooks. It can produce publication quality plots and provides interfaces for C, Julia, Python, Rust and JS.
- C++
- Data analysis
- Data Visualization
- + 3
- C
- C++
- CMake
- + 15
ioProc
ioProc is a light-weight workflow manager for Python ensuring robust, scalable and reproducible data pipelines. The tool is developed at the German Aerospace Center (DLR) for and in the scientific context of energy systems analysis, however, it is widely applicable in other scientific fields.
- Data analysis
- FAIR Data
- metadata
- + 4
- Python
- Batchfile
- Makefile
iqtools
Collection of code for working with offline complex valued time series data in Python.
- Data analysis
- Data Visualization
- Particle Accelerators
- + 1
- Python
KinFit
KinFit can be used for kinematic fitting in particle and hadron physics experiments. The iterative procedure is based on the Langrange multiplier technique. Constraints such as mass, vertex and momentum conservation are included.
- C++
- Data analysis
- open source
- C++
- C
- CMake
Made2Reflect
Compute Neutron and X-ray reflectivity from molecular dynamics simulations.
- Data analysis
- Matter
- Molecular Dynamics
- + 4
- Python
- Shell
- Dockerfile
micromechanics-indentationGUI
Graphical User Interface (GUI) software for analyzing nanoindentation experimental data
- Data analysis
- Data Visualization
- Energy
- + 5
- Python
multiGSEA
The multiGSEA R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers. The enrichment is calculated for each omics layer separately and aggregated p-values are calculated afterwards to derive a composite multi-omics pathway enrichment.
- Data analysis
- Enrichment Analysis
- FAIR Data
- + 2
- R
- TeX
novoSpaRc
novoSpaRc predicts locations of single cells in space by solely using single-cell RNA sequencing data. An existing reference database of marker genes is not required, but significantly enhances performance if available.
- Data analysis
- open source
- single-cell RNA-seq
- Jupyter Notebook
- HTML
- Python
O2A SEQUENCES
O2A SEQUENCES provides a single platform for the full metabarcoding lifecycle: it keeps samples, metadata, and sequences linked, runs containerized workflows that produce provenance-tracked ASV tables, generates submission-ready exports for public archives, and delivers AI-ready outputs.
- bioinformatics
- Data analysis
- data managment
- + 7
PeakPerformance
PeakPerformance is a Python toolbox for estimating peak areas from mass-spectrometry or HPLC datasets under uncertainty. It applies Bayesian inference using the PyMC library to parametric models of peak curves.
- Data analysis
- Earth & Environment
- mass spectrometry
- + 4
- Python
- TeX
PLUG2
Multitau and two-time correlation function computations for XPCS experiments
- Data analysis
- Matter
- XPCS
- C++
- Nix
- Shell
- + 2
sci2grid
sci2grid is a software tool for extracting, filtering, and processing data to build open-source grid models. The main objective of sci2grid is to offer easily accessible and transparent models that support further applications in science, industry, and society.
- Data analysis
- Energy
- ESD
- + 4