All software
iqtools
Collection of code for working with offline complex valued time series data in Python.
- Data analysis
- Data Visualization
- Particle Accelerators
- + 1
- Python
KinFit
KinFit can be used for kinematic fitting in particle and hadron physics experiments. The iterative procedure is based on the Langrange multiplier technique. Constraints such as mass, vertex and momentum conservation are included.
- C++
- Data analysis
- open source
- C++
- C
- CMake
Made2Reflect
Compute Neutron and X-ray reflectivity from molecular dynamics simulations.
- Data analysis
- Matter
- open source
- + 2
- Python
- Dockerfile
- Shell
micromechanics-indentationGUI
Graphical User Interface (GUI) software for analyzing nanoindentation experimental data
- Data analysis
- Data Visualization
- Energy
- + 5
- Python
novoSpaRc
novoSpaRc predicts locations of single cells in space by solely using single-cell RNA sequencing data. An existing reference database of marker genes is not required, but significantly enhances performance if available.
- Data analysis
- open source
- single-cell RNA-seq
- Jupyter Notebook
- HTML
- Python
O2A SEQUENCES
O2A SEQUENCES provides a single platform for the full metabarcoding lifecycle: it keeps samples, metadata, and sequences linked, runs containerized workflows that produce provenance-tracked ASV tables, generates submission-ready exports for public archives, and delivers AI-ready outputs.
- bioinformatics
- Data analysis
- data managment
- + 7
PeakPerformance
PeakPerformance is a Python toolbox for estimating peak areas from mass-spectrometry or HPLC datasets under uncertainty. It applies Bayesian inference using the PyMC library to parametric models of peak curves.
- Data analysis
- Earth & Environment
- mass spectrometry
- + 4
- Python
- TeX
PLUG2
Multitau and two-time correlation function computations for XPCS experiments
- Data analysis
- Matter
- XPCS
- C++
- Nix
- Shell
- + 2
sci2grid
sci2grid is a software tool for extracting, filtering, and processing data to build open-source grid models. The main objective of sci2grid is to offer easily accessible and transparent models that support further applications in science, industry, and society.
- Data analysis
- Energy
- ESD
- + 4
Timeseries Management
The Timeseries Management allows to store, visualise, organise and share timeseries data and provides access to a (broad) selection of data from different long-term projects and campaigns (e.g. TERENO, MOSES).
- Data analysis
- Data Visualization
- Earth & Environment
- + 2
UniHarmony
UniHarmony is a sklearn-inspired open-source Python library that aims to implement state-of-the-art data harmonization methods in a unified, standardized language, with extensive documentation and several use-case examples.
- Data analysis
- Image processing
- Machine learning
- + 2
- Python
- Just
- Shell
UTILE-Oxy
Automated workflow using deep learning for the analysis of videos containing oxygen bubbles in PEM electrolyzers: 1. preparing annotated dataset and training models to conduct semantic seg- mentation of bubbles and 2. automating the extraction of bubble properties for further distribution analysis.
- bubbles
- Data analysis
- Data Visualization
- + 7
- Python
- Jupyter Notebook