All software

1Filter

Order by

Keywords

Program languages

Licenses

25-33 of 33

anndata

anndata is a Python package for handling annotated data matrices in memory and on disk, positioned between pandas and xarray. anndata offers a broad range of computationally efficient features including, among others, sparse data support, lazy operations, and a PyTorch interface.

bioinformatics
data managment
FAIR Data
+ 1

Python

base-repo

Base-repo is a generic, domain-agnostic research data repository suitable to store and manage all kinds of research data. Its content is organized as DataResources, which consist of descriptive DataCite-compliant Metadata and one or more data elements, either stored as files or linked by reference.

Datacite
data managment
FAIR Data
+ 1

Java
Shell
Dockerfile

Cat4KIT

Cat4KIT is an open-source framework for cataloging, managing and publishing research data according to the FAIR principles. Building on the STAC-Ecosystem, it allows for a simple and user-friendly description, integration and discovery of research data.

data managment
Earth & Environment
FAIR Data
+ 2

Chemotion ELN

Chemotion ELN is an Open Source electronic lab notebook (ELN) for scientists working in chemistry and colleagues from neighboring disciplines, developed and updated at KIT. The web-based application allows the acquisition, management, storage, processing, and sharing of research data.

Chemistry
Electronic Lab Notebook
Experimental Sciences
+ 2

JavaScript
Ruby
SCSS
+ 5

DAMNIT

DAMNIT (Data And Metadata iNspection Interactive Thing) is a tool developed by the Data Analysis group at the European XFEL to provide users with a way to automatically create an overview of their experiment, hopefully replacing the manually-created spreadsheets that are often used.

Data analysis
FAIR Data
metadata
+ 1

Python
Dockerfile

DataDesc

The framework surrounding DataDesc, a metadata schema for software documentation with focus on interfaces, comes with a machine-actionable metadata exchange format and a software toolkit supporting the documentation, extraction and publication of software metadata.

data managment
ESD
FAIR Data
+ 4

Python
Shell
Jupyter Notebook

ioProc

ioProc is a light-weight workflow manager for Python ensuring robust, scalable and reproducible data pipelines. The tool is developed at the German Aerospace Center (DLR) for and in the scientific context of energy systems analysis, however, it is widely applicable in other scientific fields.

Data analysis
FAIR Data
metadata
+ 4

Python
Batchfile
Makefile

OSADCP Toolbox

Open-source Python toolbox called OSADCP for scientists to convert, clean, calibrate and organize binary raw vessel-mounted Acoustic Doppler Current Profiler (ADCP) data for scientific use. The toolbox is designed to process ADCP measurements in deep water by Teledyne RDI Ocean Surveyor ADCPs.

Data Visualization
Earth & Environment
FAIR Data
+ 5

Python

Tomato Tools

The Tomato Tools are a collection of graphical user interface applications related to the Acquisition, Curation and Management Workflow of marine image data. The tools can be used as standalone applications or, using the Tomato Launcher, in conjunction to form whole workflows.

C++
data managment
FAIR Data
+ 2

C++
CMake
Batchfile
+ 1