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61-72 of 73

LLview

LLview is a set of software components to monitor clusters that are controlled by a resource manager and a scheduler system.

High performance computing
hpc
monitoring
+ 2

Perl
Python
Shell

novoSpaRc

novoSpaRc predicts locations of single cells in space by solely using single-cell RNA sequencing data. An existing reference database of marker genes is not required, but significantly enhances performance if available.

Data analysis
open source
single-cell RNA-seq

Jupyter Notebook
HTML
Python

OSADCP Toolbox

Open-source Python toolbox called OSADCP for scientists to convert, clean, calibrate and organize binary raw vessel-mounted Acoustic Doppler Current Profiler (ADCP) data for scientific use. The toolbox is designed to process ADCP measurements in deep water by Teledyne RDI Ocean Surveyor ADCPs.

Data Visualization
Earth & Environment
FAIR Data
+ 5

Python

S2Downloader

The S2Downloader allows to download Sentinel-2 L2A data from the cost-free element84 AWS Amazon server. It specifically serves the purpose to download data for user-defined area of interests (AOI). It offers several parameters for filtering the data, can stack the results, mosaic and crop to AOI.

open source
python
Remote sensing
+ 1

Python
Makefile
Shell

SERGHEI

The Simulation EnviRonment for Geomorphology, Hydrodynamics and Ecohydrology in Integrated form (SERGHEI) is a multi-dimensional, multi-domain, and multi-physics model framework for environmental and landscape simulation, intended to simulate water flow and transport across landscape scales.

Earth & Environment
GPU
High performance computing
+ 4

C++
C
CMake
+ 2

sfctools

sfctools is a modeling suite for agent-based, macroeconomic and stock-flow consistent (ABM-SFC) modeling written in Python. It concentrates on agents in economics and provides a graphical model design interface.

Economics
Energy
ESD
+ 4

Python
BibTeX
Roff

SimCATS

Simulation of CSDs for Automated Tuning Solutions (SimCATS) is a python framework for simulating charge stability diagrams (CSDs) typically measured during the tuning process of qubits.

open source
python
Quantum Dots
+ 1

Jupyter Notebook
Python

simona

This package implements infrastructures for ontology analysis by offering efficient data structures, fast ontology traversal methods, and elegant visualizations. It provides a robust toolbox supporting over 70 methods for semantic similarity analysis.

Data analysis
Data Visualization
FAIR Data
+ 3

R
C++
JavaScript
+ 3

SMASH - A hadronic transport approach

SMASH is a relativistic hadronic transport approach for the dynamical description of heavy-ion reactions. It is a microscopic non-equilibrium approach and incorporates all well known hadronic states and their interactions.

CPU
Matter
open source
+ 1

C++
CMake
Shell
+ 3

TBT-Segmentation

Our tool uses Temporal Behavior Trees (TBT), a novel formalism for monitoring specifications, to segment traces provided as CSVs. Developers input a trace, and the tool analyzes it using a TBT to identify which parts of the software worked and which didn’t, aiding in system analysis and debugging.

CPS
Formal Specification
monitoring
+ 2

Rust
Python
Shell
+ 2

TrixiParticles.jl

Particle-based multiphysics simulations in Julia

CFD
Earth & Environment
Information
+ 2

Julia

UTILE-Oxy

Automated workflow using deep learning for the analysis of videos containing oxygen bubbles in PEM electrolyzers: 1. preparing annotated dataset and training models to conduct semantic seg- mentation of bubbles and 2. automating the extraction of bubble properties for further distribution analysis.

bubbles
Data analysis
Data Visualization
+ 7

Python
Jupyter Notebook