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HIFIS Software Spotlights
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Cover image for SpatialData framework

SpatialData framework

SpatialData is an open and interoperable data framework for ingesting, representing, processing and visualizing spatial omics datasets.

  • Data Visualization
  • FAIR Data
  • Multi omics
  • + 3
  • Python
  • Dockerfile
13
22
Cover image for novoSpaRc

novoSpaRc

novoSpaRc predicts locations of single cells in space by solely using single-cell RNA sequencing data. An existing reference database of marker genes is not required, but significantly enhances performance if available.

  • Data analysis
  • open source
  • single-cell RNA-seq
  • Jupyter Notebook
  • HTML
  • Python
4
0