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Helmholtz Research Software Directory

The Helmholtz Research Software Directory is a place to discover and promote research software. Designed for Research Software Engineers and Scientists, it aims to foster FAIR and reuseability of software.

FAIR Software

TSX
TypeScript
Java
+ 2

HIPSTA

The HIPpocampal Shape and Thickness Analysis Toolbox (HIPSTA) present a geometry-based method for the analysis of local hippocampal thickness and curvature and constructs an intrinsic coordinate system (unrolling/flattening) for statistical analysis across multiple participants.

MRI
Neuroimaging
open source
+ 1

Python
Dockerfile

HoloWizard

HoloWizard is a software to reconstruct near-field holograms form x-ray microscopy experiments and other sources.

Near-field holography
Phase problem
Phase retrieval
+ 2

Ideal-Equilibrium-Oxygen-Membrane-Reactor

The Python script OMR_model.py allows to simulate oxygen membrane reactors with continuous gas flow rates.

Energy
Membrane reactor
MTET
+ 3

Python

PyAPI-RTS

A Python library to read and manipulate RSCAD® draft files, used for power system modeling and simulation on RTDS simulators.

Energy
ESD
Modelling
+ 1

Python

PaN Training Catalogue for the Photon & Neutron Community

The PaN Training Catalogue is a fork from the TeSS Training Catalogue (ELIXIR) and was initially developed in our Photon and Neutron (PaN) projects ExPaNDS and PaNOSC.

catalogue
e-learning
metadata
+ 3

Ruby
HTML
JavaScript
+ 4

ULTImodel

A universal transport distribution model written in Python.

Transport Distribution
transport modelling

Python

AutoGaitA

AutoGaitA simplifies, accelerates, and standardises gait analyses after body posture tracking with deep learning algorithms in Python.

biology
Gait
Locomotion
+ 3

Python

Data Analytics Software Project - Python bindings

Python RPC wrapper for the data analytics software framework DASF

Data analysis
Data Analytics Software Framework (DASF)
Digital Earth
+ 4

Python
Jinja
BibTeX
+ 1

ELECTRODE

ELECTRODE extends the atomistic simulation tool LAMMPS to model different types of electrochemical situations. Simulations are performed at constant potential or constant charge using different approaches to control potential or charge at the electrodes.

Constant Potential Method
Electrochemistry
Molecular Dynamics

C++
Tcl
Cuda
+ 24

GasNetSim

GasNetSim is a simulation package designed for gas network steady-state simulation. It supports the steady-state natural gas network simulations with different gas mixture compositions, thus enabling accurate analysis of the impacts of hydrogen injection on the gas network.

Energy
ESD
ESD - Topic 2
+ 1

Jupyter Notebook
Python

JTrack

JTrack is a software(s) and mobile application ecosystem for digital biomarkers collection and remote assessment. JTrack is designed to collect health-related information from participants' smartphones. It also has a clinicians and administration dashboard for study, user, and data management.

digital biomarker
ecological momentary assessment
remote monitoring