All software
mHM
The mesoscale Hydrologic Model (mHM) is a well established hydrological model used by the scientific community. It is under active development with dozens of contributors and has an open community always interested in discussions.
- Earth & Environment
- mesoscale hydrologic model
- mHM
- + 2
- AGS Script
- Fortran Free Form
- Python
- + 2
micromechanics-indentationGUI
Graphical User Interface (GUI) software for analyzing nanoindentation experimental data
- Data analysis
- Data Visualization
- Energy
- + 5
- Python
Millepede II
Millepede II has been developed to solve the linear least squares problem with a simultaneous fit of all global and local parameters, irrespectively of the number of local parameters.
- Alignment
- Large linear equation system
- Matter
- + 1
- Fortran Free Form
- C
- Python
- + 2
Minion
Minion is an optimization library designed for solving complex optimization problems where gradients are unavailable or unreliable. It implements state-of-the-art evolutionary algorithms which are often missing in standard optimization libraries.
- C++
- optimization
- python
- C++
- Python
- Jupyter Notebook
- + 4
MO|DE.behave
MO|DE.behave is a Python-based software package for the estimation and simulation of discrete choice models and shall enable rapid quantitative analyses based on survey data on choice behavior, utilizing advanced discrete choice methods. Please refer to 'doi.org/10.21105/joss.05265'.
- Python
- TeX
motley-cue
enable SSH with federated identities
- AAI
- Helmholtz AAI
- OIDC
- + 1
- Python
- Makefile
- Shell
MTRESS
MTRESS (Model Template for Renewable Energy Supply Systems) facilitates the creation of energy system optimisation models for individual residential and commercial buildings as well as for neighbourhoods and entire industrial properties.
- Energy
- ESD
- ESD - Topic 2
- Python
NESTML
NESTML is a domain-specific language for neuron and synapse models. It combines an easy to understand, yet powerful syntax with good simulation performance by means of code generation.
- Modelling
- Simulation
- spiking neural networks
- Python
- Jinja
- ANTLR
- + 4
NetworKit
NetworKit is a growing open-source toolkit for large-scale network analysis. Its aim is to provide tools for the analysis of large networks in the size range from thousands to billions of edges. It implements efficient graph algorithms, many of them parallel to utilize multicore architectures.
- C++
- Cython
- Python
- + 9
nnU-Net
Automatic configuration and training of U-Net-based segmentation pipelines. Works out-of-the-box for a broad range of datasets from all imaging domain! Supports 2D and 3D (multi-channel) images.
- 2D images
- 3D images
- semantic segmentation
- + 1
- Python
- Shell
novoSpaRc
novoSpaRc predicts locations of single cells in space by solely using single-cell RNA sequencing data. An existing reference database of marker genes is not required, but significantly enhances performance if available.
- Data analysis
- open source
- single-cell RNA-seq
- Jupyter Notebook
- HTML
- Python
Nexus - Nuclear Elastic X-ray scattering Universal Software
The Nuclear Elastic X-ray scattering Universal Software (Nexus) is a Python package for simulating and fitting of Mossbauer spectra, nuclear resonant scattering (NRS) data, pure electronic X-ray reflectivities (XRR), nuclear X-ray reflectivities, and polarization dependent electronic scattering.
- Mossbauer
- Mossbauer spectroscopy
- Nuclear resonant scattering
- + 1
- C++
- SWIG
- Python
- + 2