All software
PeakPerformance
PeakPerformance is a Python toolbox for estimating peak areas from mass-spectrometry or HPLC datasets under uncertainty. It applies Bayesian inference using the PyMC library to parametric models of peak curves.
- Data analysis
- Earth & Environment
- mass spectrometry
- + 4
- Python
- TeX
PiGx
PiGx is a collection of genomics pipelines. All pipelines are easily configured with a simple sample sheet and a descriptive settings file. The result is a set of comprehensive, interactive HTML reports with interesting findings about your samples.
- HTML
- Python
- R
- + 7
PIA
The PIA Software is a Python analysis software to derive time series data (Level 1) and temperature spectra (Level 2) of INP concentrations from measurements with the PINE (Portable Ice Nucleation Experiment) instrument.
- Aerosol Research
- INP
- PINE
- Python
Potsdam Open-source Radio interferometry Tool (PORT)
PORT is a software package dedicated to the analysis of modern and historical Very Long Baseline Interferometry (VLBI) observations. It is utilized to perform the GFZ VLBI Analysis Center responsibilities, as well as state-of-the-art research in space geodesy, geophysics, and astrometry.
- Astrometry
- Earth orientation parameters
- Reference frames
- + 1
- Python
- MATLAB
- Fortran
- + 2
ProFASi
PROFASI (PROtein Folding and Aggregation SImulator) is a C++ package for HPC Monte Carlo simulations of protein folding and aggregation. It provides an all atom, implicit solvent force field, and a set of tools to perform Monte Carlo simulations. A plugin mechanism allows for user extensions.
- Monte Carlo
- Peptide Aggregation
- Protein folding
- + 2
- C++
- CMake
- Python
- + 1
py-cordex
py-cordex is a Python library for managing CORDEX grids, handling rotated/projection-based domains, and supporting CMORization of regional climate data. It enables compliant metadata, grid generation, and integration with xarray for climate workflows.
- CORDEX
- Earth & Environment
- python
- Python
- Makefile
pydidas
Pydidas (Python diffraction data analysis suite) is a toolkit for the analysis of X-ray diffraction datasets. It is designed to be accessible also for domain scientists with little experience in diffraction data analysis. Pydidas includes a graphical user interface and a command line interface.
- SAXS
- WAXS
- X-ray diffraction analysis
- + 1
- Python
- Batchfile
- Makefile
- + 1
PyQuickMaps
A slim python library to link maps and sampling data with prediction methods. Needs scipy, numpy, matplotlib, pykrige, osgeo, rasterio.
- Data Visualization
- Earth & Environment
- Predictive Mapping
- + 1
- Python
PyTango
PyTango is a python module that exposes to Python the complete Tango C++ API. This means that you can write not only Tango applications (scripts, CLIs, GUIs) that access Tango device servers but also Tango device servers themselves, all of this in pure python.
- Controled Experiments
- DCS - Distributed Control System
- Motor Control
- + 2
- Python
- C++
- CMake
- + 2
python-icat
Python interface to ICAT and IDS
- metadata
- metadata catalogue
- python
- + 1
- Python
- XSLT
- Makefile
quapps
is a software package containing a collection of exemplary application implementations based on quark.
- Discrete Optimization
- Ising Problem
- Optimization Problem
- + 3
- Jupyter Notebook
- Python
- Shell
quark
is a software package to support the mapping of combinatorial optimization problems to quantum computing interfaces via QUBO and Ising problems.
- Discrete Optimization
- Ising Problem
- Quantum Annealing
- + 2
- Python
- Shell