All software
sdaas
Simple machine learning tool in Python computing an anomaly score of seismic waveform amplitudes. By using a pre-trained Isolation forest model, the program can be used for identification of outliers in semismic data, assign robustness weights, or check instruments and metadata errors
- Machine learning
- outlier detection
- seismic metadata
- + 2
- Python
supersonic-effects
A Python package to model ozone column changes and radiative effects in response to various aircraft emissions at different altitudes over specific regions. The model combines empirical emission sensitivities to estimate effects of supersonic transport on ozone and radiation.
- aircraft
- Earth & Environment
- Earth System Modelling
- + 4
- Python
Trimmomatic
Trimmomatic is a command line tool that performs a variety of functions for Illumina paired-end and single-end sequencing data, including sequence trimming and adapter removal. It is a flexible and efficient NGS preprocessing tool, which greatly improves downstream applications.
- Earth & Environment
- Illumina
- NGS
- Java
- Dockerfile
TrixiParticles.jl
Particle-based multiphysics simulations in Julia
- CFD
- Earth & Environment
- Information
- + 2
- Julia
UrMoAC
UrMoAC is a tool for computing accessibility measures, supporting aggregation, variable limits, and intermodality.
- accessibility measures
- land-use indicators
- Java
- Python
- Batchfile
VASCA
The VAriable Source Cluster Analysis (VASCA) is an astronomy pipeline for time-variable sources.
- Astronomy
- catalogue
- Data analysis
- + 6
- Jupyter Notebook
- Python
WESkit
An implementation of the Workflow Execution Service API of the Global Alliance for Genomic Health (GA4GH), with the aim to be reliable for production purposes and robust and scalable.
- GA4GH
- Workflow Execution
wps-command-line-tool-repository
A wrapper framework around the WPS 4.0 server by 52° North to allow easy integration of command line scripts into WPS services.
- Earth & Environment
- Remote Procedure Calls
- Web Processing Service
- Java
- Scheme
- Python
- + 3
2x2, 3x3 and nxn Space-Filling Curves
Implementation of all possible forms of 2x2 and 3x3 space-filling curves, and nxn curves expanded from any specific level-1 units. It also implements the H-curve and the three-dimensional Hilbert curve.
- Data analysis
- Data Visualization
- open source
- R
- C++
- C
AI4HPC
AI4HPC, part of CoE RAISE, is an open-source library to train AI models with CFD datasets on HPC systems. AI4HPC also includes a benchmarking suite to test the limits of any system with CPUs and GPUs towards Exascale and a HyperParameter Optimization (HPO) suite for scalable HPO tasks.
- Artificial Intelligence
- Computational Fluid Dynamics
- CPU
- + 4
Alice2Modelica
This tool allows for the automated generation and calibration of white-box modelica room models based on a room description in the mini-language Modelica.
- Energy
- ESD
- ESD - Topic 2
- + 3
- Python
Alise
The Account LInking SErvice (ALISE) is a tool to link accounts at a service. The goal is to enable federated services at sites that do not yet support federated identities.
- AAI
- Helmholtz AAI
- hpc
- + 3
- Python
- HTML
- Makefile