All software
Alice2Modelica
This tool allows for the automated generation and calibration of white-box modelica room models based on a room description in the mini-language Modelica.
- Energy
- ESD
- ESD - Topic 2
- + 3
- Python
Alise
The Account LInking SErvice (ALISE) is a tool to link accounts at a service. The goal is to enable federated services at sites that do not yet support federated identities.
- AAI
- Helmholtz AAI
- hpc
- + 3
- Python
- HTML
- Makefile
Alpaca
Alpaca (Automated Lightweight Provenance Capture) captures the provenance during the execution of Python scripts that process data and stores the information using a data model based on the the W3C PROV standard.
- FAIR Data
- Information
- metadata
- + 3
- Python
AMPBA-workflow
AMPBA is a modular, Snakemake-based pipeline for reproducible amplicon metabarcoding, composable across markers and study designs, and lightweight enough to run independently on hardware from laptops to HPC clusters.
- Python
- Snakemake
- Shell
- + 2
Analysis_Insitu_tensile_degradation
Analysis scripts of in situ tensile degradation experiments with µCT. Determined are stress-strain curves and 3D degradation parameter at different force steps.
- MATLAB
Analysis-Scripts-for-C-Ring-under-strain-and-corrosion
Scripts for the analysis of deformed and degrading C-ring samples using scanning 2D XRD and µCT. Analyzed are the strain distribution over time or different deformations and degradation parameters depending on tensile or compressive strain regions.
- MATLAB
anndata
anndata is a Python package for handling annotated data matrices in memory and on disk, positioned between pandas and xarray. anndata offers a broad range of computationally efficient features including, among others, sparse data support, lazy operations, and a PyTorch interface.
- bioinformatics
- data managment
- FAIR Data
- + 1
- Python
Anomx
Turn complex time-series data into actionable intelligence. Anomx combines AI agents, anomaly detection and predictive models to connect signals, investigate change and guide action. Built primarily for on-premises deployment, with hosted SaaS coming soon.
- AI agents
- anomaly detection
- Data analysis
- + 5
Ansible Collection - hifis.toolkit
This collection provides production-ready Ansible roles used for providing services used in research and by research software engineers, but not exclusively. The collection is used to deploy popular Helmholtz Cloud services like the Helmholtz Codebase and its CI infrastructure.
- Jinja
- Python
Arbor
Arbor is a high-performance library for computational neuroscience simulations with multi-compartment, morphologically-detailed cells, from single cell models to very large networks. Arbor is written from the ground up to help neuroscientists effectively use contemporary and future HPC systems.
- GPU
- High performance computing
- Neural network
- + 4
- C++
- AGS Script
- Python
- + 7
AutoGaitA
AutoGaitA streamlines and standardises kinematic analyses of any species performing any rhythmic behaviour, such as walking, swimming or flying. AutoGaitA analyses the kinematics of body coordinate time series data obtained in 2D or 3D with marker-less or marker-based methods.
- biology
- Gait
- Locomotion
- + 3
- Python
AutoWP
Automated wind power forecasts with limited computing resources using an ensemble of diverse wind power curves.
- Energy
- Ensemble
- ESD
- + 4
- Python