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SampleDB

SampleDB is a web-based electronic lab notebook with a focus on sample and measurement metadata. With SampleDB, you can track each step in the sample lifecycle and its schema system allows you to define exactly what metadata should be stored for each process, from a simple check box to time series.

Electronic Lab Notebook
metadata
Research Data Management

Python
HTML
JavaScript
+ 4

scPower

scPower is a statistical framework for design and power analysis of multi-sample single cell transcriptomics experiments. It enables users to identify the optimal experimental parameters for cell type specific inter-individual DE and eQTL analysis using single cell RNA-seq data given a fixed budget.

Experimental design
Health
scRNA-seq
+ 1

R
HTML
CSS

SeisComP

SeisComP is a widely distributed seismological software package for real-time monitoring of earthquakes and other seismic events and provides for data acquisition, processing, distribution and interactive analysis. It has been developed within the GEOFON Program by GFZ and gempa GmbH.

Earth & Environment
earthquake
seismology
+ 1

Sensor Management System

The Sensor Management System (SMS) allows the comprehensive acquisition, administration and export of meta data of platforms, sensors and measurement configurations by stations and campaigns operated in the Helmholtz research field Earth & Environment.

catalogue
data managment
Earth & Environment
+ 4

Python
TypeScript
Vue
+ 2

SERGHEI

The Simulation EnviRonment for Geomorphology, Hydrodynamics and Ecohydrology in Integrated form (SERGHEI) is a multi-dimensional, multi-domain, and multi-physics model framework for environmental and landscape simulation, intended to simulate water flow and transport across landscape scales.

Earth & Environment
GPU
High performance computing
+ 4

C++
C
CMake
+ 2

sfctools

sfctools is a modeling suite for agent-based, macroeconomic and stock-flow consistent (ABM-SFC) modeling written in Python. It concentrates on agents in economics and provides a graphical model design interface.

Economics
Energy
ESD
+ 4

Python
BibTeX
Roff

ShockHash

A perfect hash function is a function that has no collisions on a given set. ShockHash constructs very compact perfect hash functions significantly faster than previous approaches.

C++
CMake
Shell

SicHash

A perfect hash function is a function that has no collisions on a given set. SicHash places objects in a cuckoo hash table and then stores the final hash function choice of each object in a retrieval data structure. Using irregular cuckoo hashing, each object has a different number of hash functions

C++
TeX
Shell
+ 2

Signal-Processor

Signal Processor in Python

Butterworth Filter
Data Visualization
Filter Design
+ 7

Python

SIMPA - The toolkit for Simulation and Image Processing for Photonics and Acoustics

SIMPA facilitates realistic simulations for optical and acoustic imaging modalities by providing a communication layer between various forward and inverse models. Non-experts can easily create sensible simulations from default parameters and domain experts can set up a highly customisable pipeline.

acoustic imaging
open-source
optical imaging
+ 2

Python
MATLAB
Shell
+ 1

simtools

simtools is a toolkit for simulations of ground-based imaging Cherenkov observatories like the Cherenkov Telescope Array Observatory (CTAO). It allows to set, derive, and manage simulation model parameters describing the observatory and to configure and execute large-scale simulation productions.

Astroparticle Physics
Matter
Monte Carlo simulation
+ 3

Python
Shell

SMASH - A hadronic transport approach

SMASH is a relativistic hadronic transport approach for the dynamical description of heavy-ion reactions. It is a microscopic non-equilibrium approach and incorporates all well known hadronic states and their interactions.

CPU
Matter
open source
+ 1

C++
CMake
Shell
+ 3