All software
mytoken
Mytoken is a web service to obtain OpenID Connect Access Tokens in an easy but secure way for extended periods of time and across multiple devices. In particular, mytoken was developed to provide OIDC Access Tokens to long-running compute jobs.
- AAI
- Helmholtz AAI
- OIDC
- + 2
- JavaScript
- Go
- Mustache
- + 3
NESTML
NESTML is a domain-specific language for neuron and synapse models. It combines an easy to understand, yet powerful syntax with good simulation performance by means of code generation.
- Modelling
- Simulation
- spiking neural networks
- Python
- Jinja
- ANTLR
- + 4
NovaCrate
Web-based interactive editor for creating, editing and visualizing research object crates.
- browser
- crate
- edit
- + 14
- TypeScript
- CSS
- JavaScript
OFFA
OFFA offers easy to use OpenID Federation Authentication and Authorisation for existing services. OFFA can be deployed along existing services and handle all OpenID Federation communication for your services.
- OIDC
- oidfed
- open source
- Go
- CSS
- Mustache
- + 3
oidc-agent
oidc-agent is an OpenID Connect tool suite designed to simplify authentication processes for command-line applications and workflows that require access to resources protected by OIDC. It provides a secure, but user-friendly way to manage tokens on the command-line.
- AAI
- command-line
- OIDC
- + 2
- C
- C++
- Makefile
- + 4
PiGx
PiGx is a collection of genomics pipelines. All pipelines are easily configured with a simple sample sheet and a descriptive settings file. The result is a set of comprehensive, interactive HTML reports with interesting findings about your samples.
- HTML
- Python
- R
- + 7
pydidas
Pydidas (Python diffraction data analysis suite) is a toolkit for the analysis of X-ray diffraction datasets. It is designed to be accessible also for domain scientists with little experience in diffraction data analysis. Pydidas includes a graphical user interface and a command line interface.
- SAXS
- WAXS
- X-ray diffraction analysis
- + 1
- Python
- Batchfile
- Makefile
- + 1
RAYX
Optical Simulation Software for Synchrotron Radiation
- C++
- open source
- python
- + 2
- C++
- Python
- CSS
- + 8
react-search-component
All-in-one component for rendering an elastic search UI for searching anything. Built-in support for visualizing related items in a graph and resolving unique identifiers. Initially built for searching Fair-DOs.
- component
- data
- elastic
- + 14
- TypeScript
- CSS
- MDX
- + 1
SampleDB
SampleDB is a web-based electronic lab notebook with a focus on sample and measurement metadata. With SampleDB, you can track each step in the sample lifecycle and its schema system allows you to define exactly what metadata should be stored for each process, from a simple check box to time series.
- Electronic Lab Notebook
- metadata
- Research Data Management
- Python
- HTML
- JavaScript
- + 4
scPower
scPower is a statistical framework for design and power analysis of multi-sample single cell transcriptomics experiments. It enables users to identify the optimal experimental parameters for cell type specific inter-individual DE and eQTL analysis using single cell RNA-seq data given a fixed budget.
- Experimental design
- Health
- scRNA-seq
- + 1
- R
- HTML
- CSS
spirit
Spirit is a platform-independent framework for atomistic spin-dynamics. It combines the traditional cluster workflow through a C-API with python bindings with modern visualisation capabilities in order to maximise scientists' productivity.
- Atomistic Spin Dynamics
- C++
- CUDA
- + 5
- C++
- Python
- CMake
- + 9