All software
flexynesis
A deep-learning based multi-omics sequencing data integration suite
- Python
- Scheme
- Dockerfile
FlowStrider
FlowStrider automates data flow-based threat modeling
- threat modeling
- Python
- Dockerfile
FSQC
This package provides quality assurance / quality control scripts for FastSurfer- or FreeSurfer-processed structural MRI data.
- Data analysis
- MRI
- Neuroimaging
- + 2
- Python
- Dockerfile
ETHOS.HiSim - Household Infrastructure and Building Simulator
ETHOS.HiSim is a Python package for simulation and analysis of household scenarios and building systems using modern components as alternative to fossil fuel based ones. This package integrates load profiles generation of electricity consumption, heating demand, electricity generation.
- ESD
- ESD - Topic 1
- Modeling
- + 2
- Python
- Jupyter Notebook
- TeX
- + 3
InteractiveVis
The InteractiveVis software framework provides a blueprint for evaluating 3D datasets with convolutional neural networks (CNNs), and for deriving and visualizing CNN relevance maps. This tool was developed and tested for disease detection in MRI scans. We plan to extend it to other domains.
- Data Visualization
- MRI
- open source
- + 1
- Jupyter Notebook
- HTML
- MATLAB
- + 5
Junifer
junifer (JUelich NeuroImaging FEature extractoR) is a data handling and feature extraction library targeted towards neuroimaging data.
- FeatureExtraction
- Neuroimaging
- python
- Python
- Shell
- Dockerfile
JupyterHub Outpost
JupyterHub Outpost can be used as an additional, external source to start and manage single-user servers. Like in JupyterHub itself, different Spawners can be configured at the Outpost. It's best used together with the jupyterhub-outpostspawner configured at JupyterHub.
- Jupyter
- Kubernetes
- python
- Python
- Shell
- Dockerfile
LightHouse
LightHouse helps to navigate the wild and complex sea of OpenID Federation. LightHouse is a flexible and configurable OpenID Federation Entity, and can be used as a Trust Anchor / Intermediate Authority / Resolver / Trust Mark Issuer or everything at the same time.
- OIDC
- oidfed
- OpenID Connect
- + 1
- Go
- Dockerfile
- Shell
MetaStore
MetaStore is a research data repository software for storing metadata documents and schemas. Quality and consistency are ensured by associating and validating each document against a schema. It supports JSON and XML.
- data managment
- FAIR Data
- metadata
- + 1
- Java
- JavaScript
- HTML
- + 3
MooViE
MooViE is an easy-to-use tool to display multidimensional data with input-output semantics from all research domains. It supports researcher in studying the mapping of several inputs to several outputs in large multivariate data sets.
- C++
- Data Visualization
- C++
- CMake
- Dockerfile
- + 2
mytoken
Mytoken is a web service to obtain OpenID Connect Access Tokens in an easy but secure way for extended periods of time and across multiple devices. In particular, mytoken was developed to provide OIDC Access Tokens to long-running compute jobs.
- AAI
- Helmholtz AAI
- OIDC
- + 2
- JavaScript
- Go
- Mustache
- + 3
NetworKit
NetworKit is a growing open-source toolkit for large-scale network analysis. Its aim is to provide tools for the analysis of large networks in the size range from thousands to billions of edges. It implements efficient graph algorithms, many of them parallel to utilize multicore architectures.
- C++
- Cython
- Python
- + 9