All software
VarFish
VarFish is a user-friendly web application for the quality control, filtering, prioritization, analysis, and user-based annotation of DNA variant data with a focus on rare disease genetics. It is capable of processing variant call files with single or multiple samples. ...
- Annotation
- Data analysis
- Health
- + 1
- Python
- Vue
- TypeScript
- + 9
SpecHomo
SpecHomo is a Python package for spectral homogenization of multispectral satellite data, i.e., for the transformation of the spectral information of one sensor into the spectral domain of another one.
- Earth & Environment
- Remote sensing
- spectral homogenization
- Python
- Makefile
- Shell
KaGen - Communication-free Massively Distributed Graph Generators
Network generators help to provide synthethic instances with controllable parameters by algorithm developers and researchers. KaGen provides generators for a large variety of network models, which are communication-free by making use of pseudorandomization and divide-and-conquer schemes.
- Graph Generation
- High performance computing
- Network Analysis
- + 1
- C++
- C
- Python
- + 2
xDECAF
An extensible data flow diagram constraint analysis framework for information security
- Data Flow Diagram
- Modeling
- open source
- + 1
- Java
- Python
- Nix
- + 1
Aviator
Aviator is a web service facilitating easy surveillance of scientific online tools. It currently checks more than 13,000 websites twice a day for availability and saves numerous features (response time, RAM usage security certificates, analytic tools / trackers, etc.) in a FAIR data repository.
- Data Visualization
- FAIR Data
- FAIR Software
- + 8
- Python
- HTML
- JavaScript
- + 5
COMANDO
COMANDO is a next generation modeling framework for Component-Oriented Modeling and optimizAtion for Nonlinear Design and Operation of integrated energy systems.
- Energy
- ESD
- ESD - Topic 2
- Python
FatSegNet
A fully automated deep learning pipeline for adipose tissue (visceral and subcutaneous) segmentation on abdominal Dixon MRI.
- Data analysis
- MRI
- open source
- Python
- Dockerfile
- Shell
MeshIt
The tool MeshIT generates quality tetrahedral meshes based on structural geological information. It has been developed at the GFZ Potsdam and some extensions were later added by PERFACCT. All procedures are fully automatized and require at least scattered data points as input.
- 3D meshing
- Delaunay tetrahedralization
- Delaunay triangulation
- + 2
- C++
- C
- QMake
TiGL
TiGL is a parametric aircraft geometry modeler. Using the CPACS file format and TiGL, you can model a wide range of aircraft, spacecraft and rotorcraft.
- CAD
- C++
- C
- CMake
- + 7
DataSAIL
DataSAIL is an open-source software tool that splits machine learning datasets while minimizing Information Leakage. It formulates the splitting of a dataset as a constrained minimization problem and optimizes the data split towards an objective function that accounts for information leakage.
- Convex Optimization
- data management
- Data Splitting
- + 3
- Python
- Go Template
- Shell
- + 1
Album
A Platform for Replicable Science. Album is an open-source tool that simplifies sharing and running scientific workflows. With isolated environments, metadata for easy discovery, and cross-platform support, it ensures replicability. Designed for collaboration, it’s adopted by leading researchers.
- GUI
- Interactivity
- open source
- + 2
- Python
- Dockerfile
- Shell
kww: Kohlrausch-Williams-Watts function
Library to compute the Fourier-Laplace transform of the stretched exponential function.
- Math Library
- Numerics
- Special functions
- C
- CMake
- SWIG
- + 1