All software
VarFish
VarFish is a user-friendly web application for the quality control, filtering, prioritization, analysis, and user-based annotation of DNA variant data with a focus on rare disease genetics. It is capable of processing variant call files with single or multiple samples. ...
- Annotation
- Data analysis
- Health
- + 1
- Python
- Vue
- TypeScript
- + 9
xDECAF
An extensible data flow diagram constraint analysis framework for information security
- Data Flow Diagram
- Modeling
- open source
- + 1
- Java
- Python
- Nix
- + 1
COMANDO
COMANDO is a next generation modeling framework for Component-Oriented Modeling and optimizAtion for Nonlinear Design and Operation of integrated energy systems.
- Energy
- ESD
- ESD - Topic 2
- Python
FatSegNet
A fully automated deep learning pipeline for adipose tissue (visceral and subcutaneous) segmentation on abdominal Dixon MRI.
- Data analysis
- MRI
- open source
- Python
- Dockerfile
- Shell
MeshIt
The tool MeshIT generates quality tetrahedral meshes based on structural geological information. It has been developed at the GFZ Potsdam and some extensions were later added by PERFACCT. All procedures are fully automatized and require at least scattered data points as input.
- 3D meshing
- Delaunay tetrahedralization
- Delaunay triangulation
- + 2
- C++
- C
- QMake
TiGL
TiGL is a parametric aircraft geometry modeler. Using the CPACS file format and TiGL, you can model a wide range of aircraft, spacecraft and rotorcraft.
- CAD
- C++
- C
- CMake
- + 7
Aviator
Aviator is a web service facilitating easy surveillance of scientific online tools. It currently checks more than 13,000 websites twice a day for availability and saves numerous features (response time, RAM usage security certificates, analytic tools / trackers, etc.) in a FAIR data repository.
- Data Visualization
- FAIR Data
- FAIR Software
- + 8
- Python
- HTML
- JavaScript
- + 5
Medical Imaging Interaction Toolkit (MITK)
A free and open-source software for the development of interactive medical image processing applications. MITK provides a powerful and free application called the MITK Workbench, which allows users to view, process, and segment medical images.
- Artificial Intelligence
- C++
- Data Visualization
- + 7
- C++
- CMake
- C
- + 8
kww: Kohlrausch-Williams-Watts function
Library to compute the Fourier-Laplace transform of the stretched exponential function.
- Math Library
- Numerics
- Special functions
- C
- CMake
- SWIG
- + 1
Album
A Platform for Replicable Science. Album is an open-source tool that simplifies sharing and running scientific workflows. With isolated environments, metadata for easy discovery, and cross-platform support, it ensures replicability. Designed for collaboration, it’s adopted by leading researchers.
- GUI
- Interactivity
- open source
- + 2
- Python
- Dockerfile
- Shell
ILTpy
ILTpy is a python library for performing regularized inversion of one-dimensional or multi-dimensional data without non-negativity constraint. Primary applications include magnetic resonance (NMR, EPR), and electrochemical impedance spectroscopy (distribution of relaxation times; DRT).
- Distribution of Relaxation times
- DRT
- EPR
- + 7
- Python
- HTML
Copy-Paste Imputation (CPI) for Energy Time Series
This project provides a Python implementation of an imputation method for energy time series. The CPI method copies data blocks with similar characteristics and pastes them into gaps of the time series while preserving the total energy of each gap.
- Earth & Environment
- Energy
- ESD
- + 2
- Python