All software
DeBCR
DeBCR is a sparsity-efficient deep learning framework for denoising, deblurring, and deconvolving fluorescence microscopy images. Using the m-rBCR model, it restores structural details and improves resolution. It is available as a Python package and napari plugin for efficient image restoration.
- deblurring
- deconvolution
- Deep Learning
- + 3
- Python
- Jupyter Notebook
exaCB
The exacb framework is a set of tools and configurations to enable Continuous Benchmarking (CB) on Supercomputers. With a given target application, it provides an easy common entry point to monitor application performance and collect data in a uniform manner.
- Benchmarking
- exascale
- open source
FAIR DO MoMEnT
FDO MoMEnT is a Web app that allows the creation of FAIR Digital Objects (FAIR DO). This is done in a modular way by selecting from a list of templates defining metadata available in the resulting FAIR DO.
- fairdigitalobject
- fairdo
- TypeScript
- HTML
- CSS
- + 2
Flaat
Use python decorators for authorising access to OIDC authenticated REST APIs
- AAI
- Helmholtz AAI
- OpenID Connect
- + 1
- Python
- Makefile
FLEUR
FLEUR is a feature-full, freely available FLAPW (full-potential linearized augmented-plane-wave) code, based on density-functional theory. This highly precise all-electron approach is universally applicable to all atoms of the periodic table and to systems with compact as well as open structures.
- DFT
- High performance computing
- hpc
- + 3
- Fortran Free Form
- C
- Motorola 68K Assembly
- + 2
FMSolvr
High-performance software library for N-body problems with 1/r potential using the Fast Multipole Method.
- FMM, Coulomb
go-oidfed
The go-oidfed library is an implementation of OpenID Federation in the go language with the goal to enable go applications to make use of OpenID federation.
- OIDC
- oidfed
- OpenID Connect
- + 1
- Go
Herbie - The Semantic ELN
Herbie is a semantic ELN developed at Hereon. Its open technology supports arbitrary scientific fields and enables structured, machine‑readable, FAIR documentation. It generates intuitive forms, semantically annotates all entries, and builds a knowledge graph for complex queries.
- Aeronautics, Space and Transport
- data managment
- Earth & Environment
- + 10
- Elm
- Python
- JavaScript
- + 2
jCubeR
Cube, which is used as performance report explorer for Scalasca and Score-P, is a generic tool for displaying a multi-dimensional performance space consisting of the dimensions (i) performance metric, (ii) call path, and (iii) system resource.
- High performance computing
- Information
- Performance Analysis
- + 2
Junifer
junifer (JUelich NeuroImaging FEature extractoR) is a data handling and feature extraction library targeted towards neuroimaging data.
- FeatureExtraction
- Neuroimaging
- python
- Python
- Shell
- Dockerfile
- + 1
JURI
JURI (Jülich Reporting Interface) provides a template-driven fully client-based web framework to visualise data lists and associated data graphs.
- JavaScript
- HTML
- CSS
- + 5
Kinora
A Blender Add-on for visualising pedestrian simulation and experimental trajectory data
- Blender
- open source
- pedestrian dynamics
- Python
- Shell