All software
DataSAIL
DataSAIL is an open-source software tool that splits machine learning datasets while minimizing Information Leakage. It formulates the splitting of a dataset as a constrained minimization problem and optimizes the data split towards an objective function that accounts for information leakage.
- Convex Optimization
- data management
- Data Splitting
- + 3
- Python
- Go Template
- Smarty
BrainPrint
Our BrainPrint tools provide shape descriptors of neuroanatomical structures and require a FreeSurfer or FastSurfer segmentation as a pre-processing step. BrainPrint is based on “ShapeDNA” a spectral shape descriptor.
- Data analysis
- MRI
- open source
- + 1
- Python
oemof.solph
oemof.solph is a model generator for energy system modelling and optimisation. It facilitates the formulation of (mixed-integer) linear programs from a generic graph-based structure, allowing to create multi-sector models on different levels of detail with user-defined time-resolution.
- Energy
- Energy System Analysis
- ESD
- + 2
- Python
CiTYCHEM
The CiTYCHEM extension of the EPISODE dispersion model is designed for treating complex atmospheric chemistry in urban areas and improved representation of the near-field dispersion. Applications are urban air quality studies, environmental impact assessments and sector-specific emission studies.
- Air Pollution
- Air quality
- Earth & Environment
- + 6
MEmilio
MEmilio implements various models for infectious disease dynamics, from compartmental to agent-based models. Through efficient implementation and parallelization, MEmilio brings cutting edge and compute intensive models to a large scale, enabling high-resolution spatiotemporal disease dynamics.
- Agent-based Model
- C++
- compartmental model
- + 12
- C++
- Python
- CMake
- + 3
cola
Subgroup classification is a basic task in genomic data analysis. The cola package provides a general framework for subgroup classification by consensus partitioning.
- Data analysis
- Data Visualization
- FAIR Data
- + 3
- R
- C++
xDECAF
An extensible data flow diagram constraint analysis framework for information security
- Data Flow Diagram
- Modeling
- open source
- + 1
- Java
- Python
- Nix
- + 1
Sassena
Sassena is a program to calculate X-ray and neutron scattering patterns from Molecular Dynamics simulations in the Born approximation.
- C++
- High performance computing
- Matter
- + 2
- C++
- Python
- Shell
- + 2
Aviator
Aviator is a web service facilitating easy surveillance of scientific online tools. It currently checks more than 13,000 websites twice a day for availability and saves numerous features (response time, RAM usage security certificates, analytic tools / trackers, etc.) in a FAIR data repository.
- Data Visualization
- FAIR Data
- FAIR Software
- + 8
- Python
- HTML
- JavaScript
- + 5
Automating Requirements and Documentation Comprehension (ARDoCo)
Automating Requirements and Documentation Comprehension (ARDoCo) is a framework to connect architecture documentation, requirements, and models while identifying missing or deviating elements (inconsistencies). An element can be any representable item of the model like a software component.
- Consistency
- Documentation
- Inconsistency Detection
- + 6
- Java
- Markdown
- ANTLR
- + 3
FatSegNet
A fully automated deep learning pipeline for adipose tissue (visceral and subcutaneous) segmentation on abdominal Dixon MRI.
- Data analysis
- MRI
- open source
- Python
- Dockerfile
- Shell
ARTIST
AI-enhanced differentiable Ray Tracer for Irradiation Prediction in Solar Tower Digital Twins
- Concentrated Solar Energy
- Differentiable Ray Tracing
- digital twin
- + 5
- Python