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121-132 of 239

ehrapy

ehrapy is a modular open-source Python framework designed for exploratory end-to-end analysis of heterogeneous epidemiology and electronic health record data.

Data analysis
open source
python

Python
Jupyter Notebook

EnPT

The Environmental Mapping and Analysis Program (EnMAP) is a German hyperspectral satellite mission that aims at monitoring and characterising Earth’s environment on a global scale. EnMAP measures and models key dynamic processes of Earth’s ecosystems by extracting geochemical, biochemical and biophy

Earth & Environment
EnMAP
Hyperspectral
+ 2

Python
Makefile
Shell

KaMPIng - Karlsruhe MPI next generation

KaMPIng is a flexible and (near) zero-overhead C++ wrapper for MPI, covering the whole range of abstraction levels from low-level MPI calls to convenient STL-style bindings. This allows for both rapid prototyping and highly engineered distributed algorithms.

C++
High performance computing
MPI
+ 1

C++
CMake
Shell
+ 1

PeriHub

PeriHub is a platform that provides a numerical implementation of the peridynamic theory. It is an extension of the open source Peridigm software. Peridynamics is a non-local theory that overcomes discontinuity problems of the classical theory of continuum mechanics.

Data Visualization
High performance computing
Modelling
+ 2

Python
Vue
TypeScript
+ 7

PostWRF

PostWRF is a bunch of interactive tools, written in NCL and Bash scripts, to visualize and post-process the WRF and ERA5 model outputs.

NCL
Shell
Python

pyGMS

pyGMS: lithosphere-scale rheological analyses of GMS models with Python

geophysics
geothermal modeling
GMS
+ 2

Python
Makefile

Reflectorch

Reflectorch is a Python package for the analysis of X-ray and neutron reflectivity data using Pytorch-based neural networks. It provides fast simulation of reflectometry curves by GPU, parameterization via YAML configuration files, and prior-aware training.

Machine learning
neutron
open source
+ 3

Python
TeX
Dockerfile

scanpy

Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It includes preprocessing, visualization, clustering, and differential expression testing. The Python-based implementation efficiently deals with datasets of more than one million cells.

bioinformatics
Data analysis
python

Python
R

SciTS

A tool to benchmark Time-series on different databases.

Benchmark
Benchmarking
database
+ 3

Jupyter Notebook
HTML
C#
+ 2

sdaas

Simple machine learning tool in Python computing an anomaly score of seismic waveform amplitudes. By using a pre-trained Isolation forest model, the program can be used for identification of outliers in semismic data, assign robustness weights, or check instruments and metadata errors

Machine learning
outlier detection
seismic metadata
+ 2

Python

UrMoAC

UrMoAC is a tool for computing accessibility measures, supporting aggregation, variable limits, and intermodality.

accessibility measures
land-use indicators

Java
Python
Batchfile

VASCA

The VAriable Source Cluster Analysis (VASCA) is an astronomy pipeline for time-variable sources.

Astronomy
catalogue
Data analysis
+ 6

Jupyter Notebook
Python