All software
Emipy
Emipy is a Python package to access, manipulate, analyze and visualize data on various pollutants, which is collected in the European Pollutant Release Register (E-PRTR). Therefore, it enables the easy use of this data for research in different fields (e.g., public health or energy system analysis).
- Data analysis
- Earth & Environment
- Energy
- + 3
- Python
HIPSTA
The HIPpocampal Shape and Thickness Analysis Toolbox (HIPSTA) present a geometry-based method for the analysis of local hippocampal thickness and curvature and constructs an intrinsic coordinate system (unrolling/flattening) for statistical analysis across multiple participants.
- MRI
- Neuroimaging
- open source
- + 1
- Python
- Dockerfile
LinMOG
LinMOG is a collection of tools for the generation of linear models for univariate and multivariate functions. Furthermore, the linear model can be automatically transformed into a MILP optimization formulation.
- Energy
- ESD
- ESD - Topic 2
- + 3
- Python
PyAPI-RTS
A Python library to read and manipulate RSCAD® draft files, used for power system modeling and simulation on RTDS simulators.
- Energy
- ESD
- Modelling
- + 1
- Python
PaN Training Catalogue for the Photon & Neutron Community
The PaN Training Catalogue is a fork from the TeSS Training Catalogue (ELIXIR) and was initially developed in our Photon and Neutron (PaN) projects ExPaNDS and PaNOSC.
- catalogue
- e-learning
- metadata
- + 3
- Ruby
- HTML
- JavaScript
- + 4
ULTImodel
A universal transport distribution model written in Python.
- Transport Distribution
- transport modelling
- Python
Data Analytics Software Project - Python bindings
Python RPC wrapper for the data analytics software framework DASF
- Data analysis
- Data Analytics Software Framework (DASF)
- Digital Earth
- + 4
- Python
- Jinja
- BibTeX
- + 1
ehrapy
ehrapy is a modular open-source Python framework designed for exploratory end-to-end analysis of heterogeneous epidemiology and electronic health record data.
- Data analysis
- open source
- python
- Python
ELECTRODE
ELECTRODE extends the atomistic simulation tool LAMMPS to model different types of electrochemical situations. Simulations are performed at constant potential or constant charge using different approaches to control potential or charge at the electrodes.
- Constant Potential Method
- Electrochemistry
- Molecular Dynamics
- C++
- Tcl
- C
- + 26
hermes
Implementation of the HERMES workflow to automate software publication with rich metadata.
- FAIR Software
- metadata
- python
- Python
METABOLATOR
Analysis of Microcalorimetric Metabolic Data Using Monod's Equation.
- curve fitting
- Data Science
- metabolic load
- + 1
- Python
- HTML
- Jupyter Notebook
microGWAS
microGWAS is a snakemake-powered pipeline to carry out an end-to-end microbial GWAS analysis. Starting from genome assemblies and a phenotype file, microGWAS will run a number of associations using pyseer, annotate the associations results, and generating a number of functional enrichment tests.
- GWAS
- mGWAS
- Pipeline
- + 2
- Python
- Shell
- R