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Prospective Monitoring and Management - App (PIA)

PIA is a free open-source eResearch System for monitoring of incident events and provides a digital infrastructure for conducting population-based studies in any research field - at a study centre or at home. PIA focuses on repeated surveys. #DigitalEpidemiology #LongitudinalDataCollection #FOSS

Data Collection
Digital Infrastructure
epidemiology
+ 5

TypeScript
HTML
JavaScript
+ 9

Helmholtz Research Software Directory

The Helmholtz Research Software Directory is a place to discover and promote research software. Designed for Research Software Engineers and Scientists, it aims to foster FAIR and reuseability of software.

FAIR Software

TSX
TypeScript
Java
+ 2

dCache

dCache is a system for storing and retrieving huge amounts of scientific data, distributed among a large number of heterogeneous server nodes, under a single virtual filesystem tree with a variety of standard access methods including NFSv4.1 (pNFS), FTP, WebDav and xroot.

data managment
FAIR Data

Java
JavaScript
XSLT
+ 14

Trimmomatic

Trimmomatic is a command line tool that performs a variety of functions for Illumina paired-end and single-end sequencing data, including sequence trimming and adapter removal. It is a flexible and efficient NGS preprocessing tool, which greatly improves downstream applications.

Earth & Environment
Illumina
NGS

Java

UrMoAC

UrMoAC is a tool for computing accessibility measures, supporting aggregation, variable limits, and intermodality.

accessibility measures
land-use indicators

Java
Python
Batchfile

wps-command-line-tool-repository

A wrapper framework around the WPS 4.0 server by 52° North to allow easy integration of command line scripts into WPS services.

Earth & Environment
Remote Procedure Calls
Web Processing Service

Java
Scheme
Python
+ 3

base-repo

Base-repo is a generic, domain-agnostic research data repository suitable to store and manage all kinds of research data. Its content is organized as DataResources, which consist of descriptive DataCite-compliant Metadata and one or more data elements, either stored as files or linked by reference.

Datacite
data managment
FAIR Data
+ 1

Java
Shell
Dockerfile

Bending Stiffness

Sample Java code analysing "Bending Stiffness of Actin Filaments" Experiment.

Actin
Cytoskeleton
Soft Matter Physics

Java

Continuous Integration of Architectural Performance Models (CIPM)

The CIPM approach keeps source code and architectural performance models consistent during software development and operation.

Java
Xtend
Batchfile

GIPPtools

A collection of software utilities that aid with initial pre-processing of recorded (seismic) data supporting users that borrow instruments from the GIPP.

Cube
Earth & Environment
geophysics
+ 4

Java
Shell
TeX
+ 2

RCE

RCE is a distributed integration environment for scientists and engineers to analyze, optimize, and design complex systems like aircraft, ships, or satellites.

Aeronautics, Space and Transport
collaboration
Distributed Execution
+ 3

Java
HTML
Gherkin
+ 8