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37-48 of 54

FSQC

This package provides quality assurance / quality control scripts for FastSurfer- or FreeSurfer-processed structural MRI data.

Data analysis
MRI
Neuroimaging
+ 2

Python
Dockerfile

GLAES

GLAES (Geospatial Land Availability for Energy Systems) is a geospatial framework for land eligibility analyses (LEA) to incorporate various geodata into one assessment. It also allows to optimally distribute placements. The workflow is applicable to any context where land constraints are needed.

ESD
ESD - Topic 1

Python
Dockerfile

ETHOS.HiSim - Household Infrastructure and Building Simulator

ETHOS.HiSim is a Python package for simulation and analysis of household scenarios and building systems using modern components as alternative to fossil fuel based ones. This package integrates load profiles generation of electricity consumption, heating demand, electricity generation.

ESD
ESD - Topic 1
Modeling
+ 2

Python
Jupyter Notebook
TeX
+ 3

InteractiveVis

The InteractiveVis software framework provides a blueprint for evaluating 3D datasets with convolutional neural networks (CNNs), and for deriving and visualizing CNN relevance maps. This tool was developed and tested for disease detection in MRI scans. We plan to extend it to other domains.

Data Visualization
MRI
open source
+ 1

Jupyter Notebook
HTML
MATLAB
+ 5

JupyterHub Outpost

JupyterHub Outpost can be used as an additional, external source to start and manage single-user servers. Like in JupyterHub itself, different Spawners can be configured at the Outpost. It's best used together with the jupyterhub-outpostspawner configured at JupyterHub.

Jupyter
Kubernetes
python

Python
Shell
Dockerfile

MooViE

MooViE is an easy-to-use tool to display multidimensional data with input-output semantics from all research domains. It supports researcher in studying the mapping of several inputs to several outputs in large multivariate data sets.

C++
Data Visualization

C++
CMake
Dockerfile
+ 2

openPMD-api

openPMD is an open meta-data schema that provides meaning and self-description for datasets in science and engineering. This library provides a reference API for openPMD data handling, supporting established I/O backends such as HDF5, ADIOS2, JSON and TOML from serial to MPI-parallel workflows.

ADIOS
data
file-format
+ 8

C++
Python
CMake
+ 4

pyxmake

Harmonized interfaces and workflows to selected software development tools

python
Workflow Execution

Dockerfile

Reflectorch

Reflectorch is a Python package for the analysis of X-ray and neutron reflectivity data using Pytorch-based neural networks. It provides fast simulation of reflectometry curves by GPU, parameterization via YAML configuration files, and prior-aware training.

Machine learning
neutron
open source
+ 3

Python
TeX
Dockerfile

SampleDB

SampleDB is a web-based electronic lab notebook with a focus on sample and measurement metadata. With SampleDB, you can track each step in the sample lifecycle and its schema system allows you to define exactly what metadata should be stored for each process, from a simple check box to time series.

Electronic Lab Notebook
metadata
Research Data Management

Python
HTML
JavaScript
+ 4

Sensor Management System

The Sensor Management System (SMS) allows the comprehensive acquisition, administration and export of meta data of platforms, sensors and measurement configurations by stations and campaigns operated in the Helmholtz research field Earth & Environment.

catalogue
data managment
Earth & Environment
+ 4

Python
TypeScript
Vue
+ 2

SicHash

A perfect hash function is a function that has no collisions on a given set. SicHash places objects in a cuckoo hash table and then stores the final hash function choice of each object in a retrieval data structure. Using irregular cuckoo hashing, each object has a different number of hash functions

C++
TeX
Shell
+ 2