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HIFIS Software Spotlights

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Logo for PDAF

PDAF

PDAF - the Parallel Data Assimilation Framework is one of the most widely used a software frameworks for data assimilation. PDAF provides support for ensemble modeling and fully implemented data assimilation methods to merge models and observational data which let models learn from observations.

  • Atmospheric science
  • data assimilation
  • Earth & Environment
  • + 9
  • Fortran
  • Makefile
  • Python
  • + 3
5
415
Logo for CPlantBox

CPlantBox

CPlantBox is a functional-structural plant-soil modelling framework. It simulated the 3D architecture of a plant, coupled carbon and water flow within the plant, water flow and solute transport in a 3D dynamic soil, as well as water and nutrient uptake, and rhizodeposition.

  • C++
  • FSPM
  • functional-structural soil-plant model
  • + 2
  • Python
  • C++
  • CMake
  • + 3
9
362
Logo for MercuryDPM

MercuryDPM

MercuryDPM is an open-source C++ framework for discrete particle simulations of granular materials, powders, and other particulate systems. It was started in 2009 to support complex scientific and industrial particle simulations. MercuryDPM is developed by an international open-source community.

  • Computational Granular Mechanics
  • Discrete Element Method
  • Discrete Particle Method
  • + 3
    8
    347
    Logo for CADET

    CADET

    CADET provides hierarchical models, efficient solvers and computational engineering tools for a range of biotechnological processes, including chromatography, filtration, crystallization, and fermentation.

    • adsorption
    • chromatography
    • compartment modelling
    • + 4
    • C++
    • CMake
    • C
    • + 5
    15
    334

    eCLM

    The enCore Community Land Model (eCLM) is based on the Community Land Model version 5, representing land surface processes including hydrology, biogeophysics, biogeochemistry and ecosystem dynamics.

    • Biogeochemistry
    • Earth System Modelling
    • FAIR Software
    • + 2
    • Fortran
    • CMake
    • Perl
    • + 6
    9
    4
    Logo for 13CFLUX

    13CFLUX

    13CFLUX - third-generation, high-performance simulation engine for isotopically stationary and non-stationary 13C metabolic flux analysis within an open, extensible software ecosystem.

    • Biotechnology
    • Fluxomics
    • Isotope labeling
    • + 6
    • C++
    • Python
    • CMake
    • + 2
    3
    3

    ParFlow

    ParFlow is a parallel, integrated hydrology model that simulates spatially distributed surface and subsurface flow.

    • Earth System Modelling
    • High performance computing
    • Hydrology
    • + 2
    • C
    • Tcl
    • Python
    • + 17
    1
    0
    Logo for pyPDAF

    pyPDAF

    pyPDAF provides the functionality to use the Parallel Data Assimilation Framework (PDAF) fully in Python. One can use all functionality of PDAF while implementing the case-specific code for the chosen data assimilation application in Python.

    • Atmospheric science
    • Bayesian inference
    • data assimilation
    • + 8
    • Cython
    • Python
    • Fortran
    • + 4
    2
    0
    Logo for TERENO-DOI

    TERENO-DOI

    A web-based application for creating, publishing, and managing digital object identifiers (DOIs) especially for publications within the TERENO initiative.

    • catalogue
    • data managment
    • Data Publications
    • + 9
    • Vue
    • JavaScript
    • HTML
    • + 1
    4
    0
    Logo for Timeseries Management

    Timeseries Management

    The Timeseries Management allows to store, visualise, organise and share timeseries data and provides access to a (broad) selection of data from different long-term projects and campaigns (e.g. TERENO, MOSES).

    • Data analysis
    • Data Visualization
    • Earth & Environment
    • + 2
      2
      0

      TSMP

      The Terrestrial Systems Modelling Platform (TSMP) is an open source framework implementing a scale-consistent, highly modular, massively parallel regional Earth system model. It represents transport and feedback processes of mass, energy and momentum across geo-ecosystem compartments and scales.

      • Earth & Environment
      • Fortran
      • Shell
      • C
      • + 10
      6
      0
      Logo for TSMP2

      TSMP2

      The Terrestrial Systems Modelling Platform (TSMP) is an open source framework implementing a scale-consistent, highly modular, massively parallel regional Earth system model. It represents transport and feedback processes of mass, energy and momentum across geo-ecosystem compartments and scales.

      • Earth & Environment
      • FAIR Software
      • Hydrology
      • + 1
      • CMake
      • Shell
      6
      0