All software

QUAST

QUAST is a state-of-the-art tool for (meta)genome assembly evaluation, computing over 50 quality metrics and presenting results in plain text, static plots, and interactive HTML reports.

anvi'o

anvi'o is an open-source software platform for microbial 'omics research enabling analysis and visualization of 'omics data. In development since 2014, it is currently being maintained by the Ecosystem Data Science group at the Helmholtz Institute for Functional Marine Biodiversity.

KeY

KeY is a deductive verification system for Java programs

JPlag

JPlag is one of the most popular source code plagiarism detection systems worldwide.

ETHOS.TSAM

tsam is a python package which uses different machine learning algorithms for the aggregation of time series.

KeYmaera X

An aXiomatic Tactical Theorem Prover for Hybrid Systems

CryoGrid

The CryoGrid Model Suite provides a set of numerical tools for simulating the thermal soil regime and the ice-water balance for permafrost and glaciers. Depending on the application needs different model tools are offered, characterized by different levels complexity and modularity.

Chemotion ELN

Chemotion ELN is an Open Source electronic lab notebook (ELN) for scientists working in chemistry and neighboring disciplines, developed mainly at Karlsruhe Institute of Technology (KIT). The web-based application allows the acquisition, management, storage, processing, and sharing of research data.

ESMValCore

Kadi4Mat

Kadi4Mat is a generic and open source virtual research environment.

MPTRAC

Massive-Parallel Trajectory Calculations (MPTRAC) is a Lagrangian particle dispersion model for the analysis of atmospheric transport processes in the free troposphere and stratosphere.

VarFish

VarFish is a user-friendly web application for the quality control, filtering, prioritization, analysis, and user-based annotation of DNA variant data with a focus on rare disease genetics. It is capable of processing variant call files with single or multiple samples. ...