All software
HoloWizard
HoloWizard is a software to reconstruct near-field holograms form x-ray microscopy experiments and other sources.
- Near-field holography
- Phase problem
- Phase retrieval
- + 2
- Python
- HTML
- Shell
KaMinPar
Shared-Memory and Distributed-Memory Graph Partitioning
- Data analysis
- Graphs
- High performance computing
- + 3
- C++
- CMake
- Python
- + 4
deploy2zenodo
deploy2zenodo is a script to deploy your data to zenodo. You can use it in a CI pipeline as an automatic workflow. Environmental variables allow very flexible use. Depending on the flags, the data can be curated before deployment in a merge request, in the zenodo web interface or not curated at all.
- automatic workflow
- CI pipeline
- deploy
- + 7
- Shell
SUMO
Eclipse SUMO is an open source, highly portable, microscopic and continuous traffic simulation package designed to handle large networks. It allows for intermodal simulation including pedestrians and comes with a large set of tools for scenario creation.
- Aeronautics, Space and Transport
- Modelling
- open source
- + 2
- Python
- C++
- C
- + 14
CUAS-MPI
CUAS-MPI is the MPI-parallel implementation of the confined-unconfined aquifer system model for subglacial hydrology. The model uses a single-layer equivalent porous medium approach and solves a two-dimensional Darcy-type groundwater flow equation.
- C++
- Earth & Environment
- FAIR Software
- + 4
- C++
- CMake
- C
- + 1
Flow-Alert
A machine-learning and seismic data–driven model for early warning of channelized flows.
- debris (channelized) flows
- early warning
- event detection
- + 3
- Python
- Shell
Reflectorch
Reflectorch is a Python package for the analysis of X-ray and neutron reflectivity data using Pytorch-based neural networks. It provides fast simulation of reflectometry curves by GPU, parameterization via YAML configuration files, and prior-aware training.
- Machine learning
- neutron
- open source
- + 3
- Python
- TeX
- Dockerfile
pasta::bit_vector
This header-only library contains a highly tuned (uncompressed) bit vector implementation with multiple space efficient rank and select support data structures. Our fastest rank and select support has a space overhead of only ~3.51% and makes use of data level parallelism via SIMD instructions.
- C++
- CMake
- Python
spiralize
It visualizes data along an Archimedean spiral, makes so-called spiral graph or spiral chart. It has two major advantages for visualization: 1. It is able to visualize data with very long axis with high resolution. 2. It is efficient for time series data to reveal periodic patterns.
- Data analysis
- Data Science
- Data Visualization
- + 3
- R
- JavaScript
- CSS
simona
This package implements infrastructures for ontology analysis by offering efficient data structures, fast ontology traversal methods, and elegant visualizations. It provides a robust toolbox supporting over 70 methods for semantic similarity analysis.
- Data analysis
- Data Visualization
- FAIR Data
- + 3
- R
- C++
- JavaScript
- + 3
cuBNM
A toolbox for efficient simulation of brain biophysical network models on GPUs
- Biophysical network modeling
- Brain Simulation
- GPU
- + 3
- C
- Python
- C++
- + 4
cyCONDOR
cyCONDOR, an easy-to-use computational framework for end-to-end High-Dimensional Cytometry data analysis. cyCONDOR offers guided pre-processing, clustering, dimensionality reduction, machine learning, pseudotime analysis, and batch integration, making it ideal for clinical and research settings.
- Data Visualization
- Health
- Machine learning
- + 2
- R