All software
CellRank
CellRank is a computational framework to study cellular fate decisions based on various types of single-cell genomics data. CellRank scales to large cell numbers, is fully compatible with the scverse ecosystem, and is easy to use.
- Data analysis
- fate mapping
- fate prediction
- + 7
- Python
Stable-Baselines3
Stable Baselines3 (SB3) is a set of reliable implementations of reinforcement learning algorithms in PyTorch.
- Machine learning
- robotics
- Python
- Shell
- Makefile
- + 1
pySDC
pySDC is a Python implementation of the spectral deferred correction approach and its flavors, esp. the parallel-in-time extension PFASST. It is intended for rapid prototyping and educational purposes. New ideas can be tested and first toy problems can be easily implemented.
- collocation
- high-performance computing
- Information
- + 4
- Python
- Jupyter Notebook
- C++
- + 2
ARTIST
AI-enhanced differentiable Ray Tracer for Irradiation Prediction in Solar Tower Digital Twins
- Concentrated Solar Energy
- Differentiable Ray Tracing
- digital twin
- + 5
- Python
LaPy
LaPy is an open-source Python package for differential geometry on triangle and tetrahedra meshes. It includes an FEM solver to estimate the Laplace, Poisson or Heat equations, also the computations of gradients, divergence, mean-curvature flow, conformal mappings, geodesics, ShapeDNA and more.
- computational geometry
- FEM
- Laplace
- + 4
- Python
LiSSA
LiSSA: A Framework for Generic Traceability Link Recovery In software development and maintenance, numerous artifacts such as requirements and code are produced. LiSSA aims to provide a generic solution for Traceability Link Recovery (TLR) by utilizing LLMs in combination with RAG techniques.
- Information Retrieval
- Large Language Model (LLM)
- Retrieval Augmented Generation (RAG)
- + 1
- Java
- Python
pertpy
Pertpy is a Python-based modular framework for the analysis of large-scale single-cell perturbation experiments.
- perturbation
- scverse
- single-cell RNA-seq
- Python
Propulate
An asynchronous evolutionary optimization algorithm and software package for global optimization and hyperparameter search on high-performance computers.
- Aeronautics, Space and Transport
- Earth & Environment
- Energy
- + 9
- Python
Radiative forcing of hypersonic aircraft trajectories
The software quantifies climate impact of hypersonic aircraft trajectories as a number and within seconds instead of very long numerical simulations that produce Petabytes of data. The input requires water vapor, hydrogen and nitrogen oxide emission data along flight trajectories.
- airclim
- aircraft
- atmosphere
- + 10
- Jupyter Notebook
- Python
CosmoScout VR
CosmoScout VR is an open source virtual Solar System, primarily aimed at interactive visualization of huge remote sensing products in conjunction with large-scale simulation data.
- Aeronautics, Space and Transport
- Data Visualization
- solar system
- + 1
- C++
- GLSL
- JavaScript
- + 7
AiiDA-KKR
This AiiDA plugin provides high-throughput automation and FAIR data management for the Jülich KKR codes.
- Data Visualization
- FAIR Data
- Information
- + 4
- Python
- Shell
- OpenEdge ABL
Elephant
Elephant (Electrophysiology Analysis Toolkit) is an open-source, community centered library for the analysis of electrophysiological data in the Python programming language.
- data-analysis
- electrophysiology
- neurophysiology
- + 2
- Python
- C++
- Cuda
- + 1