All software
TomoBEAR
TomoBEAR is an open-source configurable and customizable modular pipeline for streamlined and parallelized processing of large-scale cryo-electron tomography data for subtomogram averaging.
- Alignment
- automated reasoning
- cluster
- + 16
- MATLAB
- M
- Python
- + 1
atoMEC
atoMEC is a python-based average-atom code for simulations of high energy density phenomena such as in warm dense matter. It is designed as an open-source and modular python package.
- Matter
- Python
- Shell
AutoPQ
Automated point forecast-based quantile forecasts
- Energy
- ESD
- ESD - Topic 2
- + 3
- Python
Data Analytics Software Project - Python bindings
Python RPC wrapper for the data analytics software framework DASF
- Data analysis
- Data Analytics Software Framework (DASF)
- Digital Earth
- + 4
- Python
- Jinja
- BibTeX
- + 1
Emipy
Emipy is a Python package to access, manipulate, analyze and visualize data on various pollutants, which is collected in the European Pollutant Release Register (E-PRTR). Therefore, it enables the easy use of this data for research in different fields (e.g., public health or energy system analysis).
- Data analysis
- Earth & Environment
- Energy
- + 3
- Python
HIPSTA
The HIPpocampal Shape and Thickness Analysis Toolbox (HIPSTA) present a geometry-based method for the analysis of local hippocampal thickness and curvature and constructs an intrinsic coordinate system (unrolling/flattening) for statistical analysis across multiple participants.
- MRI
- Neuroimaging
- open source
- + 1
- Python
- Dockerfile
LinMOG
LinMOG is a collection of tools for the generation of linear models for univariate and multivariate functions. Furthermore, the linear model can be automatically transformed into a MILP optimization formulation.
- Energy
- ESD
- ESD - Topic 2
- + 3
- Python
microGWAS
microGWAS is a snakemake-powered pipeline to carry out an end-to-end microbial GWAS analysis. Starting from genome assemblies and a phenotype file, microGWAS will run a number of associations using pyseer, annotate the associations results, and generating a number of functional enrichment tests.
- GWAS
- mGWAS
- Pipeline
- + 2
- Python
- Shell
- R
PyAPI-RTS
A Python library to read and manipulate RSCAD® draft files, used for power system modeling and simulation on RTDS simulators.
- Energy
- ESD
- Modelling
- + 1
- Python
supersonic-effects
A Python package to model ozone column changes and radiative effects in response to various aircraft emissions at different altitudes over specific regions. The model combines empirical emission sensitivities to estimate effects of supersonic transport on ozone and radiation.
- aircraft
- Earth & Environment
- Earth System Modelling
- + 4
- Python
PaN Training Catalogue for the Photon & Neutron Community
The PaN Training Catalogue is a fork from the TeSS Training Catalogue (ELIXIR) and was initially developed in our Photon and Neutron (PaN) projects ExPaNDS and PaNOSC.
- catalogue
- e-learning
- metadata
- + 3
- Ruby
- HTML
- JavaScript
- + 4
ULTImodel
A universal transport distribution model written in Python.
- Transport Distribution
- transport modelling
- Python