All software
Minterpy
Minterpy is an open-source Python package for multivariate polynomial interpolation as well as related tasks, like nonlinear polynomial regression, numerical integration, global optimization, level-set methods, and much more.
- Interpolation
- Modeling
- numerical Integration
- Python
mmpxrt
Raytracing code for x-ray spectrometers with (not only) mossaic crystals Helps with design and analysis of x-ray spectrometers. Useful tool for (rather) experienced physicist.
- Python
- CSS
- HTML
- + 2
nnDetection
nnDetection: A Self-configuring Method for Medical Object Detection
- 3d-object-detection
- biomedical image analysis
- Detection
- + 3
- Python
- Cuda
- Dockerfile
- + 3
PtyLab.m/py/jl
A cross-platform, open-source inverse modeling toolbox for conventional and Fourier ptychography
- computational physics
- Data analysis
- Data Visualization
- + 10
- Jupyter Notebook
- Python
Software CaRD
A metadata curation dashboard for hermes.
- metadata
- JavaScript
- HTML
- CSS
- + 1
BioAutoML - Democratizing Machine Learning in Life Sciences
BioAutoML automatically runs an end-to-end ML pipeline that can be effectively employed by non-experts. BioAutoML does not require specialized human assistance, i.e., it only needs a training dataset of biological sequences (FASTA files) to perform an end-to-end ML experiment.
- Artificial Intelligence
- Big data
- BioAutoML
- + 3
- Jupyter Notebook
- Python
JUBE
JUBE is a generic, lightweight, configurable environment to run, monitor and analyse application execution in a systematic way. This software is commonly used to execute benchmarks and complex workflows on High Performance Computers, but is not limited to these systems.
- Benchmark
- Benchmarking
- High performance computing
- + 5
- Python
- Shell
- C
Mibianto
Mibianto is an easy to use web service for efficient compositional analysis of metagenomic sequencing data. By using FracMinHash on client side the uploaded sequence data is anonymized and drastically reduced in size.
- Data analysis
- Metagenomics
- Web application
- + 1
MLAir
MLAir (Machine Learning on Air data) is an environment that simplifies and accelerates the creation of new machine learning (ML) models for the analysis and forecasting of meteorological and air quality time series.
- Python
- Shell
- Jupyter Notebook
- + 2
Prospective Monitoring and Management - App (PIA)
PIA is a free open-source eResearch System for monitoring of incident events and provides a digital infrastructure for conducting population-based studies in any research field - at a study centre or at home. PIA focuses on repeated surveys. #DigitalEpidemiology #LongitudinalDataCollection #FOSS
- Data Collection
- Digital Infrastructure
- epidemiology
- + 5
- TypeScript
- HTML
- JavaScript
- + 11
pydidas
Pydidas (Python diffraction data analysis suite) is a toolkit for the analysis of X-ray diffraction datasets. It is designed to be accessible also for domain scientists with little experience in diffraction data analysis. Pydidas includes a graphical user interface and a command line interface.
- SAXS
- WAXS
- X-ray diffraction analysis
- + 1
- Python
- Batchfile
- Makefile
- + 1
QuaCCAToo
QuaCCAToo is a Python library for simulating and analyzing spin dynamics of color centers under different experiments. The systems’ time evolution under pulsed sequences are calculated through quantum master equations based on the provided Hamiltonian, with realistic pulses in the laboratory frame.
- Color Centers
- Pulsed Experiments
- Quantum Technologies
- + 1
- Python