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Logo for CADET

CADET

CADET provides hierarchical models, efficient solvers and computational engineering tools for a range of biotechnological processes, including chromatography, filtration, crystallization, and fermentation.

  • adsorption
  • chromatography
  • compartment modelling
  • + 4
  • C++
  • CMake
  • C
  • + 2
15
320
Logo for openCARP

openCARP

openCARP is a multiscale cardiac electrophysiology simulator for in silico experiments ranging from single heart cells and cardiac tissue to organ models up to the body surface ECG.

  • computational cardiology
  • digital twin
  • electrophysiology
  • + 3
  • C++
  • Python
  • C
  • + 2
33
267
Logo for SeisBench: A toolbox for machine learning in seismology

SeisBench: A toolbox for machine learning in seismology

SeisBench is an open-source Python toolbox for machine learning in seismology. It brings together the whole machine learning model lifecycle: datasets and benchmarks, models and training pipelines, and efficient implementations for deploying the models in production.

  • Earth & Environment
  • GPU
  • Helmholtz AI
  • + 4
  • Jupyter Notebook
  • Python
  • C
6
243
Logo for JURASSIC

JURASSIC

The Juelich Rapid Spectral Simulation Code (JURASSIC) is a fast infrared radiative transfer model for the analysis of atmospheric remote sensing measurements.

  • Atmospheric science
  • Climate
  • Earth & Environment
  • + 5
  • C
  • Shell
  • Visual Basic 6.0
  • + 1
2
225
Logo for GOLEM

GOLEM

GOLEM is a modelling platform for thermal-hydraulic-mechanical and non-reactive chemical processes in fractured and faulted porous media, based on the MOOSE framework

  • Earth & Environment
  • Multiphysics of porous fractured rocks
  • reservoir behaviour and induced seismicity
  • + 1
  • C++
  • SWIG
  • Assembly
  • + 5
3
161
Logo for Allpix Squared

Allpix Squared

Allpix Squared is a semiconductor detector simulation framework. The goal of the framework is to provide a complete and easy-to-use package for end-to-end simulations of semiconductor detector performance from incident ionizing radiation until the digitization of hits in the detector chip.

  • Drift-Diffusion
  • Geant4
  • Monte Carlo
  • + 5
  • C++
  • CMake
  • C
  • + 2
58
152

XRAYPAC

A software package for modeling x-ray-induced dynamics of matter

  • light-matter interaction
  • radiation chemistry
  • structural imaging
  • + 3
  • Fortran Free Form
  • Python
  • C
  • + 2
5
101
Logo for JEMRIS

JEMRIS

JEMRIS is a versatile, open-source, multi-purpose MRI simulator. It is well-suited for research and education.

  • MRI
  • Simulation
  • C++
  • Python
  • MATLAB
  • + 5
2
90

PEPC

The PEPC project (Pretty Efficient Parallel Coulomb Solver) is a public tree code that has been developed at Jülich Supercomputing Centre since the early 2000s. Our code is a non-recursive version of the Barnes-Hut algorithm, using a level-by-level approach to both tree construction and traversals.

  • Barnes-Hut
  • High performance computing
  • hpc
  • + 2
  • Fortran Free Form
  • C
  • Shell
  • + 2
7
85
Logo for MPTRAC

MPTRAC

Massive-Parallel Trajectory Calculations (MPTRAC) is a Lagrangian particle dispersion model for the analysis of atmospheric transport processes in the free troposphere and stratosphere.

  • Atmospheric science
  • Climate
  • Earth & Environment
  • + 6
  • C
  • Shell
  • HTML
  • + 4
9
72
Logo for KaGen - Communication-free Massively Distributed Graph Generators

KaGen - Communication-free Massively Distributed Graph Generators

Network generators help to provide synthethic instances with controllable parameters by algorithm developers and researchers. KaGen provides generators for a large variety of network models, which are communication-free by making use of pseudorandomization and divide-and-conquer schemes.

  • Graph Generation
  • High performance computing
  • Network Analysis
  • + 1
  • C++
  • C
  • CMake
  • + 1
9
55
Logo for MEmilio

MEmilio

MEmilio implements various models for infectious disease dynamics, from compartmental to agent-based models. Through efficient implementation and parallelization, MEmilio brings cutting edge and compute intensive models to a large scale, enabling high-resolution spatiotemporal disease dynamics.

  • Agent-based Model
  • C++
  • compartmental model
  • + 12
  • C++
  • Python
  • CMake
  • + 2
22
55