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13-24 of 81

GOLEM

GOLEM is a modelling platform for thermal-hydraulic-mechanical and non-reactive chemical processes in fractured and faulted porous media, based on the MOOSE framework

Earth & Environment
Multiphysics of porous fractured rocks
reservoir behaviour and induced seismicity
+ 1

C++
SWIG
Assembly
+ 5

143

JEMRIS

JEMRIS is a versatile, open-source, multi-purpose MRI simulator. It is well-suited for research and education.

MRI
Simulation

C++
Python
MATLAB
+ 5

rGREAT

GREAT is a type of functional enrichment analysis directly performed on genomic regions. This package implements the GREAT algorithm, also it supports directly interacting with the GREAT web service (the online GREAT analysis). Both analysis can be viewed by a Shiny application.

Data analysis
Data Visualization
FAIR Data
+ 3

PEPC

The PEPC project (Pretty Efficient Parallel Coulomb Solver) is a public tree code that has been developed at Jülich Supercomputing Centre since the early 2000s. Our code is a non-recursive version of the Barnes-Hut algorithm, using a level-by-level approach to both tree construction and traversals.

Barnes-Hut
High performance computing
hpc
+ 2

Fortran Free Form
C
Shell
+ 2

alpaka

The alpaka library is a header-only C++17 abstraction framework designed for computing accelerator development. It enables developers to implement algorithms once and execute them across a range of platforms, including x86, ARM, and RISC-V CPUs, as well as accelerators from NVIDIA, AMD, and Intel.

C++
CPU
CUDA
+ 7

C++
CMake
Shell
+ 1

Allpix Squared

Allpix Squared is a semiconductor detector simulation framework. The goal of the framework is to provide a complete and easy-to-use package for end-to-end simulations of semiconductor detector performance from incident ionizing radiation until the digitization of hits in the detector chip.

Drift-Diffusion
Geant4
Monte Carlo
+ 5

C++
CMake
C
+ 2

KaGen - Communication-free Massively Distributed Graph Generators

Network generators help to provide synthethic instances with controllable parameters by algorithm developers and researchers. KaGen provides generators for a large variety of network models, which are communication-free by making use of pseudorandomization and divide-and-conquer schemes.

Graph Generation
High performance computing
Network Analysis
+ 1

C
C++
CMake
+ 2

MeshIt

The tool MeshIT generates quality tetrahedral meshes based on structural geological information. It has been developed at the GFZ Potsdam and some extensions were later added by PERFACCT. All procedures are fully automatized and require at least scattered data points as input.

3D meshing
Delaunay tetrahedralization
Delaunay triangulation
+ 2

C++
C
QMake

TiGL

TiGL is a parametric aircraft geometry modeler. Using the CPACS file format and TiGL, you can model a wide range of aircraft, spacecraft and rotorcraft.

C++
C
CMake
+ 8

Medical Imaging Interaction Toolkit (MITK)

A free and open-source software for the development of interactive medical image processing applications. MITK provides a powerful and free application called the MITK Workbench, which allows users to view, process, and segment medical images.

Artificial Intelligence
C++
Data Visualization
+ 7

C++
CMake
C
+ 8

cola

Subgroup classification is a basic task in genomic data analysis. The cola package provides a general framework for subgroup classification by consensus partitioning.

Data analysis
Data Visualization
FAIR Data
+ 3

LYNX

LYNX (Lithosphere dYnamics Numerical toolboX) is a novel numerical simulator for modelling thermo-poromechanical coupled processes driving the deformation dynamics of the lithosphere.

damage rheology and porosity feedback
Earth & Environment
Explicit visco-elasto-plastic rheology
+ 1

C++
Assembly
Makefile
+ 4