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Logo for Vitruvius

Vitruvius

View-based System Development on Consistent Models

  • Consistency
  • Model-driven development
  • Model transformations
  • + 1
  • Java
6
193
Logo for Scalasca

Scalasca

The Scalasca Trace Tools support performance optimization of parallel programs with a collection of highly scalable trace-based tools for in-depth analyses of concurrent behavior, in particular with respect to communication and synchronization, and offers guidance in exploring their causes.

  • hpc
  • Information
  • Performance Analysis
  • + 3
    16
    192
    Logo for GAIA

    GAIA

    A framework to study the thermo-chemical evolution of rocky and icy bodies (planets, moons, and planetoids) on a global scale in the solar system and beyond.

    • CFD
    • Computational Fluid Dynamics
    • Earth & Environment
    • + 4
      19
      181
      Logo for rGREAT

      rGREAT

      GREAT is a type of functional enrichment analysis directly performed on genomic regions. This package implements the GREAT algorithm, also it supports directly interacting with the GREAT web service (the online GREAT analysis). Both analysis can be viewed by a Shiny application.

      • Data analysis
      • Data Visualization
      • FAIR Data
      • + 3
      • R
      • C++
      1
      181
      Logo for multiGSEA

      multiGSEA

      The multiGSEA R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers. The enrichment is calculated for each omics layer separately and aggregated p-values are calculated afterwards to derive a composite multi-omics pathway enrichment.

      • Data analysis
      • Enrichment Analysis
      • FAIR Data
      • + 2
      • R
      • TeX
      2
      177
      Logo for Allpix Squared

      Allpix Squared

      Allpix Squared is a semiconductor detector simulation framework. The goal of the framework is to provide a complete and easy-to-use package for end-to-end simulations of semiconductor detector performance from incident ionizing radiation until the digitization of hits in the detector chip.

      • Drift-Diffusion
      • Geant4
      • Matter
      • + 6
      • C++
      • CMake
      • C
      • + 2
      58
      174
      Logo for RiboDetector

      RiboDetector

      RiboDetector is designed to rapidly and accurately detect rRNA sequences from metagenomic, metatranscriptomic, and ncRNA sequencing data. It has been optimized for use with both CPUs and GPUs. It outperforms existing software by delivering 10-50x faster runtime and ~10x fewer false classifications.

      • Data analysis
      • FAIR Data
      • Genomics
      • + 3
      • Python
      4
      174
      Logo for Multiphase Code Repository by HZDR for OpenFOAM Foundation Software

      Multiphase Code Repository by HZDR for OpenFOAM Foundation Software

      The Multiphase Code Repository by HZDR provides research code based on OpenFOAM Foundation Software for simulating multiphase flows. Its focus is MultiMorph, an morphology-adaptive Euler-Euler model, supported by validation cases and workflows for robust industrial applications.

      • Computational Fluid Dynamics
      • Energy
      • Euler-Euler method
      • + 5
      • C++
      • Shell
      • Lex
      • + 2
      19
      160
      Logo for Chemotion ELN

      Chemotion ELN

      Chemotion ELN is an Open Source electronic lab notebook (ELN) for scientists working in chemistry and neighboring disciplines, developed mainly at Karlsruhe Institute of Technology (KIT). The web-based application allows the acquisition, management, storage, processing, and sharing of research data.

      • Chemistry
      • Electronic Lab Notebook
      • Experimental Sciences
      • + 2
      • JavaScript
      • Ruby
      • SCSS
      • + 5
      19
      155
      Logo for ESMValCore

      ESMValCore

      • Data analysis
      • Earth & Environment
      • FAIR Software
      • + 2
      • Python
      • Jupyter Notebook
      • HTML
      • + 4
      46
      148

      ETHOS.RESKit

      RESKit aids with the broad-scale simulation of renewable energy systems, primarily for the purpose of input generation to Energy System Design Models.

      • Concentrated Solar Energy
      • ESD
      • ESD - Topic 1
      • + 4
      • Python
      • HTML
      2
      147
      Logo for hybridMT

      hybridMT

      The hybridMT is MATLAB/shell environment software package for the seismic moment tensor inversion in time domain. The package allows to estimate fault plane parameters and the balance between volumetric and non-volumetric strain in the seismic source using different decomposition schemes.

      • Earth & Environment
      • moment tensor
      • seismology
        2
        136