All software
MEmilio
MEmilio implements various models for infectious disease dynamics, from compartmental to agent-based models. Through efficient implementation and parallelization, MEmilio brings cutting edge and compute intensive models to a large scale, enabling high-resolution spatiotemporal disease dynamics.
- Agent-based Model
- C++
- compartmental model
- + 12
- C++
- Python
- CMake
- + 3
Fastscape Toolbox
Fastscape is a set of open-source software components aimed at making landscape evolution models and topographic analysis algorithms readily accessible to a wide range of users.
- Earth & Environment
- Geomorphology
- landscape
- + 2
- Python
SpecHomo
SpecHomo is a Python package for spectral homogenization of multispectral satellite data, i.e., for the transformation of the spectral information of one sensor into the spectral domain of another one.
- Earth & Environment
- Remote sensing
- spectral homogenization
- Python
- Makefile
- Shell
cola
Subgroup classification is a basic task in genomic data analysis. The cola package provides a general framework for subgroup classification by consensus partitioning.
- Data analysis
- Data Visualization
- FAIR Data
- + 3
- R
- C++
KaGen - Communication-free Massively Distributed Graph Generators
Network generators help to provide synthethic instances with controllable parameters by algorithm developers and researchers. KaGen provides generators for a large variety of network models, which are communication-free by making use of pseudorandomization and divide-and-conquer schemes.
- Graph Generation
- High performance computing
- Network Analysis
- + 1
- C++
- C
- Python
- + 2
VarFish
VarFish is a user-friendly web application for the quality control, filtering, prioritization, analysis, and user-based annotation of DNA variant data with a focus on rare disease genetics. It is capable of processing variant call files with single or multiple samples. ...
- Annotation
- Data analysis
- Health
- + 1
- Python
- Vue
- TypeScript
- + 9
xDECAF
An extensible data flow diagram constraint analysis framework for information security
- Data Flow Diagram
- Modeling
- open source
- + 1
- Java
- Python
- Nix
- + 1
Sassena
Sassena is a program to calculate X-ray and neutron scattering patterns from Molecular Dynamics simulations in the Born approximation.
- C++
- High performance computing
- Matter
- + 2
- C++
- Python
- Shell
- + 2
Aviator
Aviator is a web service facilitating easy surveillance of scientific online tools. It currently checks more than 13,000 websites twice a day for availability and saves numerous features (response time, RAM usage security certificates, analytic tools / trackers, etc.) in a FAIR data repository.
- Data Visualization
- FAIR Data
- FAIR Software
- + 8
- Python
- HTML
- JavaScript
- + 5
Eventdisplay
Eventdisplay is a reconstruction and analysis pipeline for data of Imaging Atmospheric Cherenkov Telescopes (IACT).
- Astronomy
- Data analysis
- gamma-ray telescopes
- C++
- C
- Makefile
- + 3
TiGL
TiGL is a parametric aircraft geometry modeler. Using the CPACS file format and TiGL, you can model a wide range of aircraft, spacecraft and rotorcraft.
- CAD
- C++
- C
- CMake
- + 6
MeshIt
The tool MeshIT generates quality tetrahedral meshes based on structural geological information. It has been developed at the GFZ Potsdam and some extensions were later added by PERFACCT. All procedures are fully automatized and require at least scattered data points as input.
- 3D meshing
- Delaunay tetrahedralization
- Delaunay triangulation
- + 2
- C++
- C
- QMake