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Logo for LiberTEM

LiberTEM

LiberTEM is an open source platform for high-throughput distributed processing of large-scale binary data sets and live data streams using a stream-based programming model. The current focus is pixelated scanning transmission electron microscopy (4DSTEM) and scanning electron beam diffraction data.

  • 4D STEM
  • electron microscopy
  • high-throughput
  • + 3
  • Python
  • TypeScript
  • JavaScript
  • + 6
23
27
Logo for TetraX

TetraX

TetraX is a package for finite-element-method (FEM) micromagnetic modeling with the aim of providing user-friendly and versatile micromagnetic workflows. Among other features, it allows to efficiently calculate spin-wave spectra in different magnetic systems of general geometries.

  • finite-element-method
  • magnetization dynamics
  • micromagnetic modeling
  • + 4
  • Python
  • C
  • Cython
4
24
Logo for perun

perun

perun is a Python package that calculates the energy consumption of Python scripts by sampling usage statistics from hardware interfaces. It can handle MPI applications, gather data from hundreds of nodes, and accumulate it efficiently.

  • Earth & Environment
  • Energy
  • FAIR Software
  • + 2
  • Python
2
23

Radiative forcing of hypersonic aircraft trajectories

The software quantifies climate impact of hypersonic aircraft trajectories as a number and within seconds instead of very long numerical simulations that produce Petabytes of data. The input requires water vapor, hydrogen and nitrogen oxide emission data along flight trajectories.

  • airclim
  • aircraft
  • atmosphere
  • + 10
  • Jupyter Notebook
  • Python
5
22
Logo for CellRank

CellRank

CellRank is a computational framework to study cellular fate decisions based on various types of single-cell genomics data. CellRank scales to large cell numbers, is fully compatible with the scverse ecosystem, and is easy to use.

  • Data analysis
  • fate mapping
  • fate prediction
  • + 7
  • Python
14
21
Logo for Stable-Baselines3

Stable-Baselines3

Stable Baselines3 (SB3) is a set of reliable implementations of reinforcement learning algorithms in PyTorch.

  • Machine learning
  • robotics
  • Python
  • Shell
  • Makefile
  • + 1
26
21
Logo for Propulate

Propulate

An asynchronous evolutionary optimization algorithm and software package for global optimization and hyperparameter search on high-performance computers.

  • Aeronautics, Space and Transport
  • Earth & Environment
  • Energy
  • + 9
  • Python
6
20
Logo for pySDC

pySDC

pySDC is a Python implementation of the spectral deferred correction approach and its flavors, esp. the parallel-in-time extension PFASST. It is intended for rapid prototyping and educational purposes. New ideas can be tested and first toy problems can be easily implemented.

  • collocation
  • high-performance computing
  • Information
  • + 4
  • Python
  • Jupyter Notebook
  • C++
  • + 2
8
20
Logo for Flow-Alert

Flow-Alert

A machine-learning and seismic data–driven model for early warning of channelized flows.

  • debris (channelized) flows
  • early warning
  • event detection
  • + 3
  • Python
  • Shell
4
19

LaPy

LaPy is an open-source Python package for differential geometry on triangle and tetrahedra meshes. It includes an FEM solver to estimate the Laplace, Poisson or Heat equations, also the computations of gradients, divergence, mean-curvature flow, conformal mappings, geodesics, ShapeDNA and more.

  • computational geometry
  • FEM
  • Laplace
  • + 4
  • Python
2
19
Logo for HoloWizard

HoloWizard

HoloWizard is a software to reconstruct near-field holograms form x-ray microscopy experiments and other sources.

  • Near-field holography
  • Phase problem
  • Phase retrieval
  • + 2
  • Python
  • HTML
  • Shell
13
18

KaMinPar

Shared-Memory and Distributed-Memory Graph Partitioning

  • Data analysis
  • Graphs
  • High performance computing
  • + 3
  • C++
  • CMake
  • Python
  • + 4
5
18