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25-36 of 42

Medical Imaging Interaction Toolkit (MITK)

A free and open-source software for the development of interactive medical image processing applications. MITK provides a powerful and free application called the MITK Workbench, which allows users to view, process, and segment medical images.

Artificial Intelligence
C++
Data Visualization
+ 7

C++
CMake
C
+ 8

MPTRAC

Massive-Parallel Trajectory Calculations (MPTRAC) is a Lagrangian particle dispersion model for the analysis of atmospheric transport processes in the free troposphere and stratosphere.

Atmospheric science
Climate
Earth & Environment
+ 6

C
Shell
Python
+ 1

NEST

NEST is a simulator for spiking neuronal networks. A well tested and efficient tool, NEST works on your laptop and also on the world’s largest supercomputers to study behaviour of large networks of neurons.

Computational neuroscience
exascale
Modeling
+ 3

C++
Python
CMake
+ 3

119

542

NESTML

NESTML is a domain-specific language for neuron and synapse models. It combines an easy to understand, yet powerful syntax with good simulation performance by means of code generation.

Modelling
Simulation
spiking neural networks

Python
Jinja
ANTLR
+ 4

Nexus - Nuclear Elastic X-ray scattering Universal Software

The Nuclear Elastic X-ray scattering Universal Software (Nexus) is a Python package for simulating and fitting of Mossbauer spectra, nuclear resonant scattering (NRS) data, pure electronic X-ray reflectivities (XRR), nuclear X-ray reflectivities, and polarization dependent electronic scattering.

Mossbauer
Mossbauer spectroscopy
Nuclear resonant scattering
+ 1

C++
SWIG
C
+ 2

openCARP

openCARP is a multiscale cardiac electrophysiology simulator for in silico experiments ranging from single heart cells and cardiac tissue to organ models up to the body surface ECG.

computational cardiology
electrophysiology
Health
+ 2

C++
Python
C
+ 2

120

PDAF

PDAF - the Parallel Data Assimilation Framework is a software framework for interdisciplinary data assimilation. PDAF provides support for ensemble modeling and fully implemented data assimilation methods to merge models and observational data.

Atmospheric science
data assimilation
Earth & Environment
+ 9

Fortran
Shell
Makefile
+ 4

230

PEPC

The PEPC project (Pretty Efficient Parallel Coulomb Solver) is a public tree code that has been developed at Jülich Supercomputing Centre since the early 2000s. Our code is a non-recursive version of the Barnes-Hut algorithm, using a level-by-level approach to both tree construction and traversals.

Barnes-Hut
High performance computing
hpc
+ 2

Fortran Free Form
C
Shell
+ 2

PeTrack

PeTrack (Pedestrian Tracking) automatically extracts accurate pedestrian trajectories from video recordings (calibration, recognition, tracking). Individual codes enable personalized trajectories with static information of each participant. With a stereo camera also markerless tracking is possible.

Calibration
Correction
Crowd
+ 12

C++
Python
CMake
+ 2

396

Score-P

Score-P provides insight into massively parallel HPC applications, their communication, synchronization, I/O, and scaling behaviour to pinpoint performance bottlenecks and their causes.

hpc
Information
instrumentation
+ 5

C
C++
M4Sugar
+ 2

415

SERGHEI

The Simulation EnviRonment for Geomorphology, Hydrodynamics and Ecohydrology in Integrated form (SERGHEI) is a multi-dimensional, multi-domain, and multi-physics model framework for environmental and landscape simulation, intended to simulate water flow and transport across landscape scales.

Earth & Environment
GPU
High performance computing
+ 4

C++
PostScript
Shell
+ 2

SMASH - A hadronic transport approach

SMASH is a relativistic hadronic transport approach for the dynamical description of heavy-ion reactions. It is a microscopic non-equilibrium approach and incorporates all well known hadronic states and their interactions.

CPU
Matter
open source
+ 1

C++
CMake
Shell
+ 3