All HIFIS Software Spotlights
The Helmholtz Software Spotlights present outstanding software products that are developed and maintained in Helmholtz research centres. We want to raise awareness for the general importance of research software in academia, and present software that appeals equally to research, citizens, industry and politics.
FESOM
FESOM (Finite-Element/volumE Sea ice-Ocean Model) is a multi-resolution sea ice-ocean model that solves the equations of motion on unstructured meshes.
- climate modelling
- Earth & Environment
- exascale
- + 5
- Fortran
- Jupyter Notebook
- C
- + 9
FishInspector
The software FishInspector provides automatic feature detections in images of zebrafish embryos (body size, eye size, pigmentation). It is Matlab-based and provided as a Windows executable (no matlab installation needed).
- Earth & Environment
- image feature detection
- pattern recognition
- + 1
- MATLAB
- HTML
FormatFuzzer
FormatFuzzer is a framework for high-efficiency, high-quality generation and parsing of binary inputs.
- Automated Test Generation
- Fuzzing
- Information
- + 3
- Python
- C++
- Shell
- + 3
Ginkgo
Ginkgo is a high-performance math library for the solution of sparse linear systems on GPUs (AMD, Intel, NVIDIA). Ginkgo is implemented using modern C++ and provides preconditioned Krylov solvers, multigrid, sparse direct solvers, mixed precision, and batched functionality.
- GPU
- High performance computing
- Large linear equation system
- + 4
- C++
- CMake
- Cuda
- + 4
GOLEM
GOLEM is a modelling platform for thermal-hydraulic-mechanical and non-reactive chemical processes in fractured and faulted porous media, based on the MOOSE framework
- Earth & Environment
- Multiphysics of porous fractured rocks
- reservoir behaviour and induced seismicity
- + 1
- C++
- SWIG
- Assembly
- + 5
IGMAS+
IGMAS+ (Interactive Gravity and Magnetic Application System) is a software combining 3-D forward and inverse modeling, interactive visualization and interdisciplinary interpretation of potential fields and their applications under geophysical and geological data constrains.
- 3D
- Cross-platform
- Earth & Environment
- + 8
Kadi4Mat
Kadi4Mat is a generic and open source virtual research environment.
- Aeronautics, Space and Transport
- Earth & Environment
- Electronic Lab Notebook
- + 9
- Python
- Vue
- HTML
- + 2
LYNX
LYNX (Lithosphere dYnamics Numerical toolboX) is a novel numerical simulator for modelling thermo-poromechanical coupled processes driving the deformation dynamics of the lithosphere.
- damage rheology and porosity feedback
- Earth & Environment
- Explicit visco-elasto-plastic rheology
- + 1
- C++
- Assembly
- Makefile
- + 4
MassBank
MassBank is an open source mass spectral library for the identification of small chemical molecules of metabolomics, exposomics and environmental relevance.
- database
- Earth & Environment
- mass spectrometry
matRad
matRad is a dose calculation and inverse treatment planning toolkit for radiotherapy research and education written in Matlab.
- Health
- Medical Physics
- Particle Therapy
- + 2
- MATLAB
- TeX
- C++
MeshIt
The tool MeshIT generates quality tetrahedral meshes based on structural geological information. It has been developed at the GFZ Potsdam and some extensions were later added by PERFACCT. All procedures are fully automatized and require at least scattered data points as input.
- 3D meshing
- Delaunay tetrahedralization
- Delaunay triangulation
- + 2
- C++
- C
- QMake
mHM
The mesoscale Hydrologic Model (mHM) is a well established hydrological model used by the scientific community. It is under active development with dozens of contributors and has an open community always interested in discussions.
- Earth & Environment
- mesoscale hydrologic model
- mHM
- + 2
- AGS Script
- Fortran Free Form
- Python
- + 2