Helmholtz-Zentrum Hereon
OxyPOM
OxyPOM: a biogeochemical model for Oxygen and Particulate Organic Matter dynamics with detailed temperature sensitivity
- Biogeochemistry
- Hypoxia
- Phytoplankton viral infection
- + 2
- Fortran Free Form
- R
- Shell
- + 2
PointNeighbors.jl
PointNeighbors.jl is a package for neighborhood search with fixed search radius in 1D, 2D and 3D point clouds.
- Julia
py-cordex
py-cordex is a Python library for managing CORDEX grids, handling rotated/projection-based domains, and supporting CMORization of regional climate data. It enables compliant metadata, grid generation, and integration with xarray for climate workflows.
- CORDEX
- Earth & Environment
- python
- Python
- Makefile
pydidas
Pydidas (Python diffraction data analysis suite) is a toolkit for the analysis of X-ray diffraction datasets. It is designed to be accessible also for domain scientists with little experience in diffraction data analysis. Pydidas includes a graphical user interface and a command line interface.
- SAXS
- WAXS
- X-ray diffraction analysis
- + 1
- Python
- Batchfile
- Makefile
- + 1
Pyrratt
Bayesian fitting of numerical models to experimental data, returning the full posterior rather than a single best fit. Built on NumPyro/JAX; especially suited to neutron/X-ray reflectivity curves via the md2reflect Abelès/Parratt backend.
- Bayesian
- Data analysis
- FAIR Data
- + 4
- Python
- Shell
Sassena
Sassena is a program to calculate X-ray and neutron scattering patterns from Molecular Dynamics simulations in the Born approximation.
- C++
- High performance computing
- Matter
- + 2
- C++
- Python
- Shell
- + 2
Trixi.jl
Trixi.jl is a numerical simulation framework for conservation laws written in Julia with an extensible design with a fast implementation, Trixi.jl is focused on being easy to use for new or inexperienced users, including the installation and postprocessing procedures.
- CFD
- Earth & Environment
- hpc
- + 3
- Julia
- Jupyter Notebook
- Shell
- + 2
TrixiParticles.jl
Particle-based multiphysics simulations in Julia
- CFD
- Earth & Environment
- Information
- + 2
- Julia
UrbEm - Urban Emission downscaling for air quality modeling
UrbEm enables in a modular manner downscaling of gridded regional emissions with specific spatial proxies based on a variety of open access, robust, sustainable and frequently updated sources. UrbEm can be applied to any urban area in Europe and provides methodological homogeneity between cities.
- Air quality
- Chemistry Transport Modeling
- Earth & Environment
- + 2
- Python
- R
Viable North Sea (ViNoS): A NetLogo Agent-based Model of German Small-scale Fisheries
A Social-Ecological Systems (SES) model focussing on the adaptive behaviour of fishers facing regulatory, economic, and resource changes.
- Agent-based Model
- Earth&Environment
- FAIR Software
- + 10
YAMLEvents.jl
Inspect YAML syntax as a lazy stream of parser events, without constructing dictionaries, arrays, or resolved scalar values. Most YAML readers immediately turn a document into dictionaries, arrays, and scalar values. YAMLEvents.jl stops at the parser-event layer instead.
- events
- Julia
- Parser
- + 1
- Julia